Protein–RNA interactions for Protein: Q8BX39

Cphx2, Cytoplasmic polyadenylated homeobox, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cphx2Q8BX39 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Gm45058-201ENSMUST00000205810 766 ntBASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Gm7213-201ENSMUST00000215977 950 ntBASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cphx2Q8BX39 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Gm9987-201ENSMUST00000069768 567 ntBASIC11.73□□□□□ -0.53
Cphx2Q8BX39 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cphx2Q8BX39 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Cphx2Q8BX39 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cphx2Q8BX39 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cphx2Q8BX39 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cphx2Q8BX39 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cphx2Q8BX39 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cphx2Q8BX39 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cphx2Q8BX39 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cphx2Q8BX39 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cphx2Q8BX39 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cphx2Q8BX39 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cphx2Q8BX39 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cphx2Q8BX39 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cphx2Q8BX39 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC11.72□□□□□ -0.53
Cphx2Q8BX39 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.72□□□□□ -0.53
Cphx2Q8BX39 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cphx2Q8BX39 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cphx2Q8BX39 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cphx2Q8BX39 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cphx2Q8BX39 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cphx2Q8BX39 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cphx2Q8BX39 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cphx2Q8BX39 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cphx2Q8BX39 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cphx2Q8BX39 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms