Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.54■□□□□ 0.08
Usp43Q8BUM9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp43Q8BUM9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Usp43Q8BUM9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Usp43Q8BUM9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp43Q8BUM9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Gm13884-201ENSMUST00000118103 829 ntBASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Gm15173-201ENSMUST00000122049 433 ntBASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Gm6550-201ENSMUST00000187574 993 ntBASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Gm28659-201ENSMUST00000188013 759 ntBASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.53■□□□□ 0.08
Usp43Q8BUM9 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Usp43Q8BUM9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Usp43Q8BUM9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.53■□□□□ 0.08
Usp43Q8BUM9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Usp43Q8BUM9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp43Q8BUM9 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.52■□□□□ 0.08
Usp43Q8BUM9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp43Q8BUM9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp43Q8BUM9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp43Q8BUM9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Usp43Q8BUM9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Usp43Q8BUM9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp43Q8BUM9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp43Q8BUM9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Usp43Q8BUM9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Usp43Q8BUM9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Usp43Q8BUM9 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.52■□□□□ 0.08
Usp43Q8BUM9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp43Q8BUM9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp43Q8BUM9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp43Q8BUM9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Usp43Q8BUM9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.52■□□□□ 0.08
Usp43Q8BUM9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp43Q8BUM9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.52■□□□□ 0.08
Usp43Q8BUM9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp43Q8BUM9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp43Q8BUM9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp43Q8BUM9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp43Q8BUM9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Usp43Q8BUM9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Usp43Q8BUM9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Usp43Q8BUM9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Usp43Q8BUM9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Usp43Q8BUM9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Usp43Q8BUM9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Usp43Q8BUM9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Usp43Q8BUM9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Usp43Q8BUM9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Usp43Q8BUM9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Usp43Q8BUM9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Usp43Q8BUM9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Usp43Q8BUM9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Usp43Q8BUM9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Usp43Q8BUM9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Usp43Q8BUM9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Usp43Q8BUM9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Usp43Q8BUM9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Usp43Q8BUM9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Usp43Q8BUM9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Usp43Q8BUM9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.51■□□□□ 0.07
Usp43Q8BUM9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Usp43Q8BUM9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Usp43Q8BUM9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.51■□□□□ 0.07
Usp43Q8BUM9 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.51■□□□□ 0.07
Usp43Q8BUM9 Gm9682-201ENSMUST00000197505 556 ntBASIC15.51■□□□□ 0.07
Usp43Q8BUM9 Gm10060-201ENSMUST00000212002 111 ntBASIC15.51■□□□□ 0.07
Usp43Q8BUM9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Usp43Q8BUM9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.51■□□□□ 0.07
Usp43Q8BUM9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.51■□□□□ 0.07
Usp43Q8BUM9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Usp43Q8BUM9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.51■□□□□ 0.07
Usp43Q8BUM9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Usp43Q8BUM9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Usp43Q8BUM9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Usp43Q8BUM9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Usp43Q8BUM9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Usp43Q8BUM9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Usp43Q8BUM9 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms