Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smco3Q8BQM7 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Gm11336-201ENSMUST00000118168 334 ntBASIC12.67□□□□□ -0.38
Smco3Q8BQM7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smco3Q8BQM7 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Gm29707-201ENSMUST00000196325 491 ntBASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smco3Q8BQM7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.65□□□□□ -0.38
Smco3Q8BQM7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.65□□□□□ -0.38
Smco3Q8BQM7 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smco3Q8BQM7 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms