Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcal1Q8BJL0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcal1Q8BJL0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcal1Q8BJL0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Gm22175-201ENSMUST00000175007 78 ntBASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Gm24158-201ENSMUST00000175263 71 ntBASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcal1Q8BJL0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Gm7774-201ENSMUST00000200064 533 ntBASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcal1Q8BJL0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcal1Q8BJL0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcal1Q8BJL0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcal1Q8BJL0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcal1Q8BJL0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcal1Q8BJL0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.29■□□□□ 0.2
Smarcal1Q8BJL0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Smarcal1Q8BJL0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Smarcal1Q8BJL0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.29■□□□□ 0.2
Smarcal1Q8BJL0 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcal1Q8BJL0 Gm20949-201ENSMUST00000206478 952 ntBASIC16.29■□□□□ 0.2
Smarcal1Q8BJL0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms