Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.7■□□□□ 0.26
Depdc1bQ8BH88 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.69■□□□□ 0.26
Depdc1bQ8BH88 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 Gm12497-201ENSMUST00000138778 237 ntBASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Depdc1bQ8BH88 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Depdc1bQ8BH88 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Depdc1bQ8BH88 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Depdc1bQ8BH88 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Depdc1bQ8BH88 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.67■□□□□ 0.26
Depdc1bQ8BH88 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.67■□□□□ 0.26
Depdc1bQ8BH88 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Depdc1bQ8BH88 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Depdc1bQ8BH88 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Depdc1bQ8BH88 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Depdc1bQ8BH88 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Depdc1bQ8BH88 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Depdc1bQ8BH88 Gm4535-201ENSMUST00000182274 558 ntBASIC16.67■□□□□ 0.26
Depdc1bQ8BH88 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.67■□□□□ 0.26
Depdc1bQ8BH88 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.67■□□□□ 0.26
Depdc1bQ8BH88 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Depdc1bQ8BH88 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.67■□□□□ 0.26
Depdc1bQ8BH88 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Depdc1bQ8BH88 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms