Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.81□□□□□ -0.04
Trim23Q8BGX0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Gm9727-201ENSMUST00000161387 555 ntBASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim23Q8BGX0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.79□□□□□ -0.04
Trim23Q8BGX0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim23Q8BGX0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim23Q8BGX0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim23Q8BGX0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms