Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc116Q80X53 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc116Q80X53 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ccdc116Q80X53 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc116Q80X53 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.04■□□□□ -0
Ccdc116Q80X53 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ccdc116Q80X53 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc116Q80X53 Efs-202ENSMUST00000227037 2540 ntBASIC15.04■□□□□ -0
Ccdc116Q80X53 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc116Q80X53 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.04■□□□□ -0
Ccdc116Q80X53 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ccdc116Q80X53 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc116Q80X53 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc116Q80X53 Gm15358-201ENSMUST00000119249 520 ntBASIC15.04■□□□□ -0
Ccdc116Q80X53 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.04■□□□□ -0
Ccdc116Q80X53 Gm11780-201ENSMUST00000136880 516 ntBASIC15.04■□□□□ -0
Ccdc116Q80X53 Gm27646-201ENSMUST00000183989 110 ntBASIC15.04■□□□□ -0
Ccdc116Q80X53 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc116Q80X53 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc116Q80X53 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.04■□□□□ -0
Ccdc116Q80X53 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc116Q80X53 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc116Q80X53 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc116Q80X53 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc116Q80X53 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc116Q80X53 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc116Q80X53 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc116Q80X53 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ccdc116Q80X53 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc116Q80X53 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc116Q80X53 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc116Q80X53 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc116Q80X53 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc116Q80X53 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc116Q80X53 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc116Q80X53 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc116Q80X53 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc116Q80X53 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc116Q80X53 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc116Q80X53 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc116Q80X53 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc116Q80X53 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc116Q80X53 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Ccdc116Q80X53 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Ccdc116Q80X53 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.03■□□□□ -0
Ccdc116Q80X53 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.03■□□□□ -0
Ccdc116Q80X53 Gm44357-201ENSMUST00000195897 142 ntBASIC15.03■□□□□ -0
Ccdc116Q80X53 Gm19658-201ENSMUST00000196231 138 ntBASIC15.03■□□□□ -0
Ccdc116Q80X53 Gm44367-201ENSMUST00000196836 138 ntBASIC15.03■□□□□ -0
Ccdc116Q80X53 Gm44350-201ENSMUST00000197197 138 ntBASIC15.03■□□□□ -0
Ccdc116Q80X53 Gm44390-201ENSMUST00000197533 144 ntBASIC15.03■□□□□ -0
Ccdc116Q80X53 Gm44313-201ENSMUST00000198018 138 ntBASIC15.03■□□□□ -0
Ccdc116Q80X53 Gm44486-201ENSMUST00000198508 138 ntBASIC15.03■□□□□ -0
Ccdc116Q80X53 Gm44314-201ENSMUST00000199263 138 ntBASIC15.03■□□□□ -0
Ccdc116Q80X53 Gm44394-201ENSMUST00000199558 138 ntBASIC15.03■□□□□ -0
Ccdc116Q80X53 Gm44484-201ENSMUST00000199873 138 ntBASIC15.03■□□□□ -0
Ccdc116Q80X53 Gm44466-201ENSMUST00000200264 138 ntBASIC15.03■□□□□ -0
Ccdc116Q80X53 Gm44359-201ENSMUST00000200671 138 ntBASIC15.03■□□□□ -0
Ccdc116Q80X53 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc116Q80X53 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc116Q80X53 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc116Q80X53 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ccdc116Q80X53 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc116Q80X53 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc116Q80X53 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc116Q80X53 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc116Q80X53 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc116Q80X53 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ccdc116Q80X53 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ccdc116Q80X53 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc116Q80X53 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc116Q80X53 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc116Q80X53 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc116Q80X53 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ccdc116Q80X53 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.02■□□□□ -0
Ccdc116Q80X53 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.02■□□□□ -0
Ccdc116Q80X53 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.02■□□□□ -0
Ccdc116Q80X53 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.02■□□□□ -0
Ccdc116Q80X53 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ccdc116Q80X53 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ccdc116Q80X53 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc116Q80X53 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc116Q80X53 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Ccdc116Q80X53 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc116Q80X53 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc116Q80X53 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc116Q80X53 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc116Q80X53 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc116Q80X53 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc116Q80X53 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc116Q80X53 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc116Q80X53 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.01□□□□□ -0.01
Ccdc116Q80X53 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.01□□□□□ -0.01
Ccdc116Q80X53 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc116Q80X53 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.01□□□□□ -0.01
Ccdc116Q80X53 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc116Q80X53 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc116Q80X53 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc116Q80X53 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc116Q80X53 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms