Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vrk1Q80X41 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Vrk1Q80X41 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.64□□□□□ -0.07
Vrk1Q80X41 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.64□□□□□ -0.07
Vrk1Q80X41 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vrk1Q80X41 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Vrk1Q80X41 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Vrk1Q80X41 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vrk1Q80X41 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.64□□□□□ -0.07
Vrk1Q80X41 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vrk1Q80X41 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vrk1Q80X41 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Vrk1Q80X41 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vrk1Q80X41 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.64□□□□□ -0.07
Vrk1Q80X41 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.64□□□□□ -0.07
Vrk1Q80X41 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.64□□□□□ -0.07
Vrk1Q80X41 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.64□□□□□ -0.07
Vrk1Q80X41 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.64□□□□□ -0.07
Vrk1Q80X41 Gm45612-201ENSMUST00000211320 160 ntBASIC14.64□□□□□ -0.07
Vrk1Q80X41 Gm18246-201ENSMUST00000221023 728 ntBASIC14.64□□□□□ -0.07
Vrk1Q80X41 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vrk1Q80X41 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Vrk1Q80X41 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vrk1Q80X41 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vrk1Q80X41 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vrk1Q80X41 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vrk1Q80X41 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Vrk1Q80X41 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vrk1Q80X41 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vrk1Q80X41 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vrk1Q80X41 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.63□□□□□ -0.07
Vrk1Q80X41 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.63□□□□□ -0.07
Vrk1Q80X41 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Gm7063-201ENSMUST00000186840 981 ntBASIC14.63□□□□□ -0.07
Vrk1Q80X41 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.63□□□□□ -0.07
Vrk1Q80X41 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vrk1Q80X41 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vrk1Q80X41 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vrk1Q80X41 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.62□□□□□ -0.07
Vrk1Q80X41 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.62□□□□□ -0.07
Vrk1Q80X41 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vrk1Q80X41 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vrk1Q80X41 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vrk1Q80X41 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vrk1Q80X41 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vrk1Q80X41 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vrk1Q80X41 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Vrk1Q80X41 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vrk1Q80X41 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.62□□□□□ -0.07
Vrk1Q80X41 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.62□□□□□ -0.07
Vrk1Q80X41 Thap2-203ENSMUST00000218989 527 ntBASIC14.62□□□□□ -0.07
Vrk1Q80X41 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vrk1Q80X41 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vrk1Q80X41 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vrk1Q80X41 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vrk1Q80X41 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.62□□□□□ -0.07
Vrk1Q80X41 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vrk1Q80X41 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vrk1Q80X41 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vrk1Q80X41 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vrk1Q80X41 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.61□□□□□ -0.07
Vrk1Q80X41 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms