Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Gm45612-201ENSMUST00000211320 160 ntBASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 Gm25948-201ENSMUST00000175334 112 ntBASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 Gm27301-201ENSMUST00000184012 127 ntBASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3tc2Q80VA5 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3tc2Q80VA5 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms