Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh19Q80TF3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh19Q80TF3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.06■□□□□ 0
Pcdh19Q80TF3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh19Q80TF3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdh19Q80TF3 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.06■□□□□ 0
Pcdh19Q80TF3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh19Q80TF3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdh19Q80TF3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.06■□□□□ 0
Pcdh19Q80TF3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdh19Q80TF3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.06■□□□□ 0
Pcdh19Q80TF3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdh19Q80TF3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh19Q80TF3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh19Q80TF3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh19Q80TF3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh19Q80TF3 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh19Q80TF3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdh19Q80TF3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh19Q80TF3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Pcdh19Q80TF3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdh19Q80TF3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Pcdh19Q80TF3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdh19Q80TF3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdh19Q80TF3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdh19Q80TF3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdh19Q80TF3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdh19Q80TF3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdh19Q80TF3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.05■□□□□ -0
Pcdh19Q80TF3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.05■□□□□ -0
Pcdh19Q80TF3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdh19Q80TF3 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.05■□□□□ -0
Pcdh19Q80TF3 Gm10175-201ENSMUST00000086013 645 ntBASIC15.05■□□□□ -0
Pcdh19Q80TF3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh19Q80TF3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdh19Q80TF3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Pcdh19Q80TF3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh19Q80TF3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.05■□□□□ -0
Pcdh19Q80TF3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh19Q80TF3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh19Q80TF3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh19Q80TF3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Pcdh19Q80TF3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh19Q80TF3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdh19Q80TF3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh19Q80TF3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdh19Q80TF3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Pcdh19Q80TF3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.05■□□□□ -0
Pcdh19Q80TF3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh19Q80TF3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Pcdh19Q80TF3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh19Q80TF3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh19Q80TF3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh19Q80TF3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Pcdh19Q80TF3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh19Q80TF3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh19Q80TF3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh19Q80TF3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Pcdh19Q80TF3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh19Q80TF3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh19Q80TF3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh19Q80TF3 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Pcdh19Q80TF3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.04■□□□□ -0
Pcdh19Q80TF3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdh19Q80TF3 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Pcdh19Q80TF3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.04■□□□□ -0
Pcdh19Q80TF3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.04■□□□□ -0
Pcdh19Q80TF3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.04■□□□□ -0
Pcdh19Q80TF3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.04■□□□□ -0
Pcdh19Q80TF3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh19Q80TF3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.04■□□□□ -0
Pcdh19Q80TF3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.04■□□□□ -0
Pcdh19Q80TF3 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.04■□□□□ -0
Pcdh19Q80TF3 Gm18246-201ENSMUST00000221023 728 ntBASIC15.04■□□□□ -0
Pcdh19Q80TF3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh19Q80TF3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh19Q80TF3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh19Q80TF3 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh19Q80TF3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh19Q80TF3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.03■□□□□ -0
Pcdh19Q80TF3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.03■□□□□ -0
Pcdh19Q80TF3 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms