Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx4Q7TNK1 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Rfx4Q7TNK1 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx4Q7TNK1 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx4Q7TNK1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx4Q7TNK1 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx4Q7TNK1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx4Q7TNK1 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx4Q7TNK1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.75□□□□□ -0.05
Rfx4Q7TNK1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.75□□□□□ -0.05
Rfx4Q7TNK1 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx4Q7TNK1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Rfx4Q7TNK1 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.75□□□□□ -0.05
Rfx4Q7TNK1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx4Q7TNK1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx4Q7TNK1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx4Q7TNK1 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx4Q7TNK1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx4Q7TNK1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx4Q7TNK1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx4Q7TNK1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx4Q7TNK1 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx4Q7TNK1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.75□□□□□ -0.05
Rfx4Q7TNK1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx4Q7TNK1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Gm14722-201ENSMUST00000118943 689 ntBASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx4Q7TNK1 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms