Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vma21Q78T54 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vma21Q78T54 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.52□□□□□ -0.41
Vma21Q78T54 Gm13312-201ENSMUST00000119631 718 ntBASIC12.52□□□□□ -0.41
Vma21Q78T54 Gm6345-202ENSMUST00000180900 204 ntBASIC12.52□□□□□ -0.41
Vma21Q78T54 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.52□□□□□ -0.41
Vma21Q78T54 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vma21Q78T54 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.52□□□□□ -0.41
Vma21Q78T54 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vma21Q78T54 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vma21Q78T54 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.52□□□□□ -0.41
Vma21Q78T54 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vma21Q78T54 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vma21Q78T54 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vma21Q78T54 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vma21Q78T54 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vma21Q78T54 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vma21Q78T54 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vma21Q78T54 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.52□□□□□ -0.41
Vma21Q78T54 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vma21Q78T54 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vma21Q78T54 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vma21Q78T54 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vma21Q78T54 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vma21Q78T54 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vma21Q78T54 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Vma21Q78T54 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vma21Q78T54 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vma21Q78T54 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vma21Q78T54 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vma21Q78T54 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vma21Q78T54 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.51□□□□□ -0.41
Vma21Q78T54 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vma21Q78T54 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vma21Q78T54 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Vma21Q78T54 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vma21Q78T54 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.51□□□□□ -0.41
Vma21Q78T54 Gm17808-201ENSMUST00000200859 894 ntBASIC12.51□□□□□ -0.41
Vma21Q78T54 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vma21Q78T54 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vma21Q78T54 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vma21Q78T54 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vma21Q78T54 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vma21Q78T54 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.51□□□□□ -0.41
Vma21Q78T54 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vma21Q78T54 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Vma21Q78T54 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vma21Q78T54 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Vma21Q78T54 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vma21Q78T54 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Vma21Q78T54 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vma21Q78T54 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vma21Q78T54 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vma21Q78T54 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vma21Q78T54 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vma21Q78T54 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vma21Q78T54 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vma21Q78T54 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vma21Q78T54 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vma21Q78T54 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vma21Q78T54 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vma21Q78T54 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vma21Q78T54 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.5□□□□□ -0.41
Vma21Q78T54 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Vma21Q78T54 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.5□□□□□ -0.41
Vma21Q78T54 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vma21Q78T54 Rprl3-201ENSMUST00000157400 290 ntBASIC12.5□□□□□ -0.41
Vma21Q78T54 Gm10231-201ENSMUST00000181584 441 ntBASIC12.5□□□□□ -0.41
Vma21Q78T54 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vma21Q78T54 Gm10175-202ENSMUST00000208752 441 ntBASIC12.5□□□□□ -0.41
Vma21Q78T54 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Vma21Q78T54 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.5□□□□□ -0.41
Vma21Q78T54 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vma21Q78T54 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vma21Q78T54 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vma21Q78T54 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vma21Q78T54 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Vma21Q78T54 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vma21Q78T54 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vma21Q78T54 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vma21Q78T54 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vma21Q78T54 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vma21Q78T54 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vma21Q78T54 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vma21Q78T54 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vma21Q78T54 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Vma21Q78T54 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vma21Q78T54 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vma21Q78T54 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vma21Q78T54 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Vma21Q78T54 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Vma21Q78T54 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vma21Q78T54 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Vma21Q78T54 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vma21Q78T54 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vma21Q78T54 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Vma21Q78T54 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vma21Q78T54 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.49□□□□□ -0.41
Vma21Q78T54 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Vma21Q78T54 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms