Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Gm43575-201ENSMUST00000196420 516 ntBASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Sybu-209ENSMUST00000228639 4113 ntBASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shc4Q6S5L9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shc4Q6S5L9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shc4Q6S5L9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.35□□□□□ -0.11
Shc4Q6S5L9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shc4Q6S5L9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shc4Q6S5L9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shc4Q6S5L9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shc4Q6S5L9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shc4Q6S5L9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shc4Q6S5L9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shc4Q6S5L9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.35□□□□□ -0.11
Shc4Q6S5L9 Mir3113-201ENSMUST00000175478 76 ntBASIC14.35□□□□□ -0.11
Shc4Q6S5L9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.35□□□□□ -0.11
Shc4Q6S5L9 Mir8117-201ENSMUST00000184773 107 ntBASIC14.35□□□□□ -0.11
Shc4Q6S5L9 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.35□□□□□ -0.11
Shc4Q6S5L9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shc4Q6S5L9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shc4Q6S5L9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shc4Q6S5L9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shc4Q6S5L9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shc4Q6S5L9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shc4Q6S5L9 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.35□□□□□ -0.11
Shc4Q6S5L9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shc4Q6S5L9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Shc4Q6S5L9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shc4Q6S5L9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shc4Q6S5L9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shc4Q6S5L9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Shc4Q6S5L9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Shc4Q6S5L9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Shc4Q6S5L9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Shc4Q6S5L9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shc4Q6S5L9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.33□□□□□ -0.12
Shc4Q6S5L9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shc4Q6S5L9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Shc4Q6S5L9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shc4Q6S5L9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shc4Q6S5L9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shc4Q6S5L9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.33□□□□□ -0.12
Shc4Q6S5L9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shc4Q6S5L9 Gm14822-201ENSMUST00000122247 291 ntBASIC14.33□□□□□ -0.12
Shc4Q6S5L9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shc4Q6S5L9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Shc4Q6S5L9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shc4Q6S5L9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shc4Q6S5L9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms