Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rif1Q6PR54 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.91□□□□□ -0.34
Rif1Q6PR54 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rif1Q6PR54 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rif1Q6PR54 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rif1Q6PR54 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rif1Q6PR54 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rif1Q6PR54 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rif1Q6PR54 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.9□□□□□ -0.34
Rif1Q6PR54 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rif1Q6PR54 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rif1Q6PR54 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.9□□□□□ -0.34
Rif1Q6PR54 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rif1Q6PR54 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rif1Q6PR54 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rif1Q6PR54 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rif1Q6PR54 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.9□□□□□ -0.34
Rif1Q6PR54 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rif1Q6PR54 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rif1Q6PR54 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rif1Q6PR54 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rif1Q6PR54 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rif1Q6PR54 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rif1Q6PR54 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Rif1Q6PR54 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rif1Q6PR54 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.9□□□□□ -0.34
Rif1Q6PR54 Mir7032-201ENSMUST00000185154 79 ntBASIC12.9□□□□□ -0.34
Rif1Q6PR54 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.9□□□□□ -0.34
Rif1Q6PR54 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.9□□□□□ -0.34
Rif1Q6PR54 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rif1Q6PR54 Gm24526-201ENSMUST00000082921 158 ntBASIC12.9□□□□□ -0.34
Rif1Q6PR54 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.9□□□□□ -0.34
Rif1Q6PR54 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Rif1Q6PR54 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rif1Q6PR54 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rif1Q6PR54 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rif1Q6PR54 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rif1Q6PR54 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rif1Q6PR54 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.89□□□□□ -0.35
Rif1Q6PR54 Dmtn-207ENSMUST00000228001 2437 ntBASIC12.89□□□□□ -0.35
Rif1Q6PR54 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rif1Q6PR54 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.89□□□□□ -0.35
Rif1Q6PR54 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Gm12390-201ENSMUST00000117897 397 ntBASIC12.89□□□□□ -0.35
Rif1Q6PR54 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.89□□□□□ -0.35
Rif1Q6PR54 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.89□□□□□ -0.35
Rif1Q6PR54 AU022133-201ENSMUST00000200601 873 ntBASIC12.89□□□□□ -0.35
Rif1Q6PR54 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.89□□□□□ -0.35
Rif1Q6PR54 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rif1Q6PR54 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Gm43138-201ENSMUST00000199123 708 ntBASIC12.88□□□□□ -0.35
Rif1Q6PR54 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rif1Q6PR54 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Sybu-209ENSMUST00000228639 4113 ntBASIC12.88□□□□□ -0.35
Rif1Q6PR54 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.88□□□□□ -0.35
Rif1Q6PR54 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms