Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup98Q6PFD9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup98Q6PFD9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.9■□□□□ 0.46
Nup98Q6PFD9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup98Q6PFD9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup98Q6PFD9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup98Q6PFD9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Nup98Q6PFD9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup98Q6PFD9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.9■□□□□ 0.46
Nup98Q6PFD9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nup98Q6PFD9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup98Q6PFD9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup98Q6PFD9 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.9■□□□□ 0.46
Nup98Q6PFD9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup98Q6PFD9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup98Q6PFD9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup98Q6PFD9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nup98Q6PFD9 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nup98Q6PFD9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nup98Q6PFD9 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nup98Q6PFD9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nup98Q6PFD9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.89■□□□□ 0.45
Nup98Q6PFD9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nup98Q6PFD9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup98Q6PFD9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nup98Q6PFD9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup98Q6PFD9 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nup98Q6PFD9 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup98Q6PFD9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup98Q6PFD9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup98Q6PFD9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Nup98Q6PFD9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nup98Q6PFD9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup98Q6PFD9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Nup98Q6PFD9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Nup98Q6PFD9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Nup98Q6PFD9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Nup98Q6PFD9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup98Q6PFD9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup98Q6PFD9 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nup98Q6PFD9 Gm13464-201ENSMUST00000119418 935 ntBASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Gm13823-201ENSMUST00000119930 345 ntBASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Gm38225-201ENSMUST00000194001 393 ntBASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.88■□□□□ 0.45
Nup98Q6PFD9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Prob1-201ENSMUST00000097619 3021 ntBASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Gm9824-201ENSMUST00000178707 561 ntBASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.88■□□□□ 0.45
Nup98Q6PFD9 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Gm18049-201ENSMUST00000208909 581 ntBASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nup98Q6PFD9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nup98Q6PFD9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Nup98Q6PFD9 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nup98Q6PFD9 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nup98Q6PFD9 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms