Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Gm18489-201ENSMUST00000172565 551 ntBASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Gm37153-201ENSMUST00000193637 231 ntBASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Hdac4Q6NZM9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 Gm7222-201ENSMUST00000117512 906 ntBASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 Gm7230-201ENSMUST00000173026 815 ntBASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Hdac4Q6NZM9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac4Q6NZM9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac4Q6NZM9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac4Q6NZM9 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.14■□□□□ 0.33
Hdac4Q6NZM9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac4Q6NZM9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac4Q6NZM9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Hdac4Q6NZM9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac4Q6NZM9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Hdac4Q6NZM9 Gm10499-201ENSMUST00000174094 934 ntBASIC17.14■□□□□ 0.33
Hdac4Q6NZM9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.14■□□□□ 0.33
Hdac4Q6NZM9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac4Q6NZM9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.14■□□□□ 0.33
Hdac4Q6NZM9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.14■□□□□ 0.33
Hdac4Q6NZM9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.14■□□□□ 0.33
Hdac4Q6NZM9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac4Q6NZM9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Hdac4Q6NZM9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac4Q6NZM9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac4Q6NZM9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac4Q6NZM9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac4Q6NZM9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac4Q6NZM9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac4Q6NZM9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac4Q6NZM9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac4Q6NZM9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac4Q6NZM9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac4Q6NZM9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac4Q6NZM9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac4Q6NZM9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac4Q6NZM9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.13■□□□□ 0.33
Hdac4Q6NZM9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac4Q6NZM9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Hdac4Q6NZM9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac4Q6NZM9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac4Q6NZM9 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.13■□□□□ 0.33
Hdac4Q6NZM9 Gm7862-201ENSMUST00000121461 292 ntBASIC17.13■□□□□ 0.33
Hdac4Q6NZM9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Hdac4Q6NZM9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Hdac4Q6NZM9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac4Q6NZM9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac4Q6NZM9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.13■□□□□ 0.33
Hdac4Q6NZM9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac4Q6NZM9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac4Q6NZM9 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac4Q6NZM9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac4Q6NZM9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac4Q6NZM9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac4Q6NZM9 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms