Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scube3Q66PY1 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scube3Q66PY1 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Scube3Q66PY1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Scube3Q66PY1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Scube3Q66PY1 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Scube3Q66PY1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scube3Q66PY1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Scube3Q66PY1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scube3Q66PY1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.11■□□□□ 0.17
Scube3Q66PY1 Gm27300-201ENSMUST00000184085 97 ntBASIC16.11■□□□□ 0.17
Scube3Q66PY1 Gm27335-201ENSMUST00000184758 97 ntBASIC16.11■□□□□ 0.17
Scube3Q66PY1 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC16.11■□□□□ 0.17
Scube3Q66PY1 Gm43416-201ENSMUST00000201916 1015 ntBASIC16.11■□□□□ 0.17
Scube3Q66PY1 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scube3Q66PY1 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.11■□□□□ 0.17
Scube3Q66PY1 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scube3Q66PY1 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scube3Q66PY1 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scube3Q66PY1 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scube3Q66PY1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.11■□□□□ 0.17
Scube3Q66PY1 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scube3Q66PY1 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scube3Q66PY1 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC16.11■□□□□ 0.17
Scube3Q66PY1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.11■□□□□ 0.17
Scube3Q66PY1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scube3Q66PY1 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Scube3Q66PY1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scube3Q66PY1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scube3Q66PY1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scube3Q66PY1 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scube3Q66PY1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scube3Q66PY1 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scube3Q66PY1 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Gm14140-201ENSMUST00000119999 995 ntBASIC16.1■□□□□ 0.17
Scube3Q66PY1 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.1■□□□□ 0.17
Scube3Q66PY1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scube3Q66PY1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Scube3Q66PY1 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scube3Q66PY1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.09■□□□□ 0.17
Scube3Q66PY1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scube3Q66PY1 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.09■□□□□ 0.17
Scube3Q66PY1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.09■□□□□ 0.17
Scube3Q66PY1 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scube3Q66PY1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Scube3Q66PY1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Scube3Q66PY1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms