Protein–RNA interactions for Protein: Q65CL1

Ctnna3, Catenin alpha-3, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna3Q65CL1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ctnna3Q65CL1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ctnna3Q65CL1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctnna3Q65CL1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ctnna3Q65CL1 Gm6089-201ENSMUST00000197666 938 ntBASIC17.28■□□□□ 0.36
Ctnna3Q65CL1 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctnna3Q65CL1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Ctnna3Q65CL1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctnna3Q65CL1 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctnna3Q65CL1 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Ctnna3Q65CL1 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ctnna3Q65CL1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctnna3Q65CL1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ctnna3Q65CL1 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctnna3Q65CL1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ctnna3Q65CL1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctnna3Q65CL1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctnna3Q65CL1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.27■□□□□ 0.36
Ctnna3Q65CL1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctnna3Q65CL1 Gm9727-201ENSMUST00000161387 555 ntBASIC17.27■□□□□ 0.36
Ctnna3Q65CL1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.27■□□□□ 0.36
Ctnna3Q65CL1 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.27■□□□□ 0.36
Ctnna3Q65CL1 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctnna3Q65CL1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.27■□□□□ 0.36
Ctnna3Q65CL1 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctnna3Q65CL1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctnna3Q65CL1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctnna3Q65CL1 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctnna3Q65CL1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctnna3Q65CL1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctnna3Q65CL1 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ctnna3Q65CL1 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ctnna3Q65CL1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ctnna3Q65CL1 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ctnna3Q65CL1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ctnna3Q65CL1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ctnna3Q65CL1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.27■□□□□ 0.35
Ctnna3Q65CL1 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Gm4459-201ENSMUST00000118750 468 ntBASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Gm7506-201ENSMUST00000207758 815 ntBASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Gm8655-201ENSMUST00000221159 852 ntBASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Ctnna3Q65CL1 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Gm6550-201ENSMUST00000187574 993 ntBASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Gm10576-201ENSMUST00000191927 825 ntBASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 App-207ENSMUST00000227737 2827 ntBASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ctnna3Q65CL1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms