Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC19.39■□□□□ 0.69
Clcn1Q64347 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn1Q64347 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn1Q64347 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn1Q64347 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn1Q64347 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Clcn1Q64347 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn1Q64347 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn1Q64347 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn1Q64347 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn1Q64347 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn1Q64347 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Clcn1Q64347 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Clcn1Q64347 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn1Q64347 Mir449b-201ENSMUST00000104833 80 ntBASIC19.38■□□□□ 0.69
Clcn1Q64347 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.38■□□□□ 0.69
Clcn1Q64347 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn1Q64347 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn1Q64347 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC19.38■□□□□ 0.69
Clcn1Q64347 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC19.38■□□□□ 0.69
Clcn1Q64347 Gm10499-201ENSMUST00000174094 934 ntBASIC19.38■□□□□ 0.69
Clcn1Q64347 Gm22175-201ENSMUST00000175007 78 ntBASIC19.38■□□□□ 0.69
Clcn1Q64347 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.38■□□□□ 0.69
Clcn1Q64347 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.38■□□□□ 0.69
Clcn1Q64347 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.38■□□□□ 0.69
Clcn1Q64347 Nudt18-203ENSMUST00000228768 1578 ntBASIC19.38■□□□□ 0.69
Clcn1Q64347 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn1Q64347 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn1Q64347 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn1Q64347 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn1Q64347 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC19.38■□□□□ 0.69
Clcn1Q64347 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn1Q64347 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn1Q64347 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn1Q64347 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn1Q64347 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn1Q64347 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn1Q64347 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn1Q64347 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn1Q64347 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn1Q64347 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn1Q64347 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn1Q64347 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC19.37■□□□□ 0.69
Clcn1Q64347 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn1Q64347 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn1Q64347 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn1Q64347 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Clcn1Q64347 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn1Q64347 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn1Q64347 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC19.37■□□□□ 0.69
Clcn1Q64347 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC19.37■□□□□ 0.69
Clcn1Q64347 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC19.37■□□□□ 0.69
Clcn1Q64347 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn1Q64347 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC19.37■□□□□ 0.69
Clcn1Q64347 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn1Q64347 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Clcn1Q64347 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Clcn1Q64347 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn1Q64347 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn1Q64347 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Clcn1Q64347 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Clcn1Q64347 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Clcn1Q64347 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Clcn1Q64347 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn1Q64347 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Clcn1Q64347 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.36■□□□□ 0.69
Clcn1Q64347 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn1Q64347 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn1Q64347 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn1Q64347 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn1Q64347 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Clcn1Q64347 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Clcn1Q64347 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn1Q64347 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn1Q64347 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn1Q64347 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC19.36■□□□□ 0.69
Clcn1Q64347 Wdyhv1-206ENSMUST00000227142 786 ntBASIC19.36■□□□□ 0.69
Clcn1Q64347 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC19.36■□□□□ 0.69
Clcn1Q64347 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Clcn1Q64347 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn1Q64347 Gm38327-201ENSMUST00000195852 1755 ntBASIC19.36■□□□□ 0.69
Clcn1Q64347 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC19.36■□□□□ 0.69
Clcn1Q64347 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Clcn1Q64347 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Clcn1Q64347 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn1Q64347 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn1Q64347 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn1Q64347 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn1Q64347 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Clcn1Q64347 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn1Q64347 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Clcn1Q64347 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn1Q64347 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.35■□□□□ 0.69
Clcn1Q64347 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Clcn1Q64347 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Clcn1Q64347 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn1Q64347 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn1Q64347 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn1Q64347 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC19.35■□□□□ 0.69
Clcn1Q64347 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms