Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.51□□□□□ -0.41
Col7a1Q63870 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.51□□□□□ -0.41
Col7a1Q63870 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.51□□□□□ -0.41
Col7a1Q63870 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.51□□□□□ -0.41
Col7a1Q63870 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.51□□□□□ -0.41
Col7a1Q63870 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.51□□□□□ -0.41
Col7a1Q63870 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.51□□□□□ -0.41
Col7a1Q63870 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col7a1Q63870 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col7a1Q63870 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 Mir1894-201ENSMUST00000122802 81 ntBASIC12.51□□□□□ -0.41
Col7a1Q63870 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.51□□□□□ -0.41
Col7a1Q63870 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.51□□□□□ -0.41
Col7a1Q63870 Gm19184-201ENSMUST00000196798 928 ntBASIC12.51□□□□□ -0.41
Col7a1Q63870 Gm8463-201ENSMUST00000208573 613 ntBASIC12.51□□□□□ -0.41
Col7a1Q63870 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.51□□□□□ -0.41
Col7a1Q63870 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.5□□□□□ -0.41
Col7a1Q63870 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.5□□□□□ -0.41
Col7a1Q63870 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col7a1Q63870 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col7a1Q63870 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col7a1Q63870 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col7a1Q63870 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.5□□□□□ -0.41
Col7a1Q63870 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col7a1Q63870 Gm8652-201ENSMUST00000181363 964 ntBASIC12.5□□□□□ -0.41
Col7a1Q63870 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.5□□□□□ -0.41
Col7a1Q63870 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Col7a1Q63870 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col7a1Q63870 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Col7a1Q63870 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col7a1Q63870 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col7a1Q63870 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.5□□□□□ -0.41
Col7a1Q63870 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col7a1Q63870 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col7a1Q63870 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col7a1Q63870 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col7a1Q63870 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col7a1Q63870 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col7a1Q63870 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Col7a1Q63870 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col7a1Q63870 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col7a1Q63870 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col7a1Q63870 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col7a1Q63870 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Col7a1Q63870 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col7a1Q63870 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col7a1Q63870 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col7a1Q63870 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.49□□□□□ -0.41
Col7a1Q63870 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col7a1Q63870 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col7a1Q63870 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm27516-201ENSMUST00000184237 98 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm29310-201ENSMUST00000185468 696 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm21825-201ENSMUST00000185728 696 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm29109-201ENSMUST00000185895 696 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm21896-201ENSMUST00000186520 696 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm21873-201ENSMUST00000186728 696 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm21794-201ENSMUST00000187056 696 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm21880-201ENSMUST00000187275 696 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm21826-201ENSMUST00000187451 696 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm21198-201ENSMUST00000188393 696 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm21749-201ENSMUST00000189343 696 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm21901-201ENSMUST00000189568 696 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm29424-201ENSMUST00000189716 696 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm28599-201ENSMUST00000189838 694 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm21867-201ENSMUST00000189917 696 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm29269-201ENSMUST00000190087 696 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm21722-201ENSMUST00000190153 696 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm28423-201ENSMUST00000190701 696 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm21899-201ENSMUST00000190745 696 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm21910-201ENSMUST00000191163 696 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm21849-201ENSMUST00000191571 696 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm28678-201ENSMUST00000191593 696 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm20910-201ENSMUST00000193268 696 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm21871-201ENSMUST00000194621 696 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col7a1Q63870 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col7a1Q63870 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col7a1Q63870 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.49□□□□□ -0.41
Col7a1Q63870 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.49□□□□□ -0.41
Col7a1Q63870 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms