Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VcanQ62059 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VcanQ62059 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
VcanQ62059 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
VcanQ62059 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VcanQ62059 Gm21854-201ENSMUST00000179901 471 ntBASIC14.26□□□□□ -0.13
VcanQ62059 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.26□□□□□ -0.13
VcanQ62059 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VcanQ62059 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VcanQ62059 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VcanQ62059 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VcanQ62059 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
VcanQ62059 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.26□□□□□ -0.13
VcanQ62059 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VcanQ62059 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VcanQ62059 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VcanQ62059 Gm10499-201ENSMUST00000174094 934 ntBASIC14.25□□□□□ -0.13
VcanQ62059 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.25□□□□□ -0.13
VcanQ62059 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.25□□□□□ -0.13
VcanQ62059 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.25□□□□□ -0.13
VcanQ62059 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.25□□□□□ -0.13
VcanQ62059 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VcanQ62059 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
VcanQ62059 Olfr582-201ENSMUST00000098212 960 ntBASIC14.25□□□□□ -0.13
VcanQ62059 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VcanQ62059 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VcanQ62059 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VcanQ62059 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VcanQ62059 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
VcanQ62059 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VcanQ62059 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VcanQ62059 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VcanQ62059 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VcanQ62059 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.25□□□□□ -0.13
VcanQ62059 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
VcanQ62059 Gm20445-201ENSMUST00000061905 565 ntBASIC14.25□□□□□ -0.13
VcanQ62059 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
VcanQ62059 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VcanQ62059 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VcanQ62059 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.25□□□□□ -0.13
VcanQ62059 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VcanQ62059 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VcanQ62059 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VcanQ62059 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VcanQ62059 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
VcanQ62059 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.25□□□□□ -0.13
VcanQ62059 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VcanQ62059 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VcanQ62059 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
VcanQ62059 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VcanQ62059 Gm16026-204ENSMUST00000162652 683 ntBASIC14.24□□□□□ -0.13
VcanQ62059 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.24□□□□□ -0.13
VcanQ62059 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VcanQ62059 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.24□□□□□ -0.13
VcanQ62059 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.24□□□□□ -0.13
VcanQ62059 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.24□□□□□ -0.13
VcanQ62059 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VcanQ62059 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VcanQ62059 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VcanQ62059 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VcanQ62059 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VcanQ62059 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VcanQ62059 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.24□□□□□ -0.13
VcanQ62059 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.24□□□□□ -0.13
VcanQ62059 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
VcanQ62059 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
VcanQ62059 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VcanQ62059 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.24□□□□□ -0.13
VcanQ62059 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VcanQ62059 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VcanQ62059 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VcanQ62059 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VcanQ62059 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VcanQ62059 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VcanQ62059 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VcanQ62059 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VcanQ62059 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VcanQ62059 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VcanQ62059 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
VcanQ62059 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.23□□□□□ -0.13
VcanQ62059 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VcanQ62059 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
VcanQ62059 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
VcanQ62059 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VcanQ62059 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VcanQ62059 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VcanQ62059 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VcanQ62059 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VcanQ62059 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.23□□□□□ -0.13
VcanQ62059 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VcanQ62059 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VcanQ62059 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
VcanQ62059 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
VcanQ62059 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
VcanQ62059 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VcanQ62059 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.23□□□□□ -0.13
VcanQ62059 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
VcanQ62059 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VcanQ62059 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VcanQ62059 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms