Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Foxc1Q61572 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.31□□□□□ -0.6
Foxc1Q61572 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Foxc1Q61572 Gm2651-201ENSMUST00000203560 838 ntBASIC11.31□□□□□ -0.6
Foxc1Q61572 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Foxc1Q61572 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Foxc1Q61572 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.31□□□□□ -0.6
Foxc1Q61572 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC11.31□□□□□ -0.6
Foxc1Q61572 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Foxc1Q61572 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC11.3□□□□□ -0.6
Foxc1Q61572 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.3□□□□□ -0.6
Foxc1Q61572 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Foxc1Q61572 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Foxc1Q61572 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.3□□□□□ -0.6
Foxc1Q61572 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.3□□□□□ -0.6
Foxc1Q61572 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Foxc1Q61572 Gm43037-201ENSMUST00000196808 250 ntBASIC11.3□□□□□ -0.6
Foxc1Q61572 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC11.3□□□□□ -0.6
Foxc1Q61572 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC11.3□□□□□ -0.6
Foxc1Q61572 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.3□□□□□ -0.6
Foxc1Q61572 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.3□□□□□ -0.6
Foxc1Q61572 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Foxc1Q61572 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.3□□□□□ -0.6
Foxc1Q61572 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.3□□□□□ -0.6
Foxc1Q61572 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Foxc1Q61572 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Foxc1Q61572 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.3□□□□□ -0.6
Foxc1Q61572 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxc1Q61572 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Foxc1Q61572 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Foxc1Q61572 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxc1Q61572 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.29□□□□□ -0.6
Foxc1Q61572 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxc1Q61572 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxc1Q61572 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxc1Q61572 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Foxc1Q61572 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Foxc1Q61572 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Foxc1Q61572 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.29□□□□□ -0.6
Foxc1Q61572 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxc1Q61572 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxc1Q61572 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Foxc1Q61572 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxc1Q61572 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.29□□□□□ -0.6
Foxc1Q61572 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxc1Q61572 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.29□□□□□ -0.6
Foxc1Q61572 AW822252-206ENSMUST00000208904 237 ntBASIC11.29□□□□□ -0.6
Foxc1Q61572 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.29□□□□□ -0.6
Foxc1Q61572 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.29□□□□□ -0.6
Foxc1Q61572 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.29□□□□□ -0.6
Foxc1Q61572 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC11.29□□□□□ -0.6
Foxc1Q61572 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC11.29□□□□□ -0.6
Foxc1Q61572 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxc1Q61572 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxc1Q61572 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms