Protein–RNA interactions for Protein: Q61500

Itm2a, Integral membrane protein 2A, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itm2aQ61500 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Itm2aQ61500 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.12■□□□□ 0.01
Itm2aQ61500 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Itm2aQ61500 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.12■□□□□ 0.01
Itm2aQ61500 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.12■□□□□ 0.01
Itm2aQ61500 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Itm2aQ61500 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.12■□□□□ 0.01
Itm2aQ61500 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Itm2aQ61500 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Itm2aQ61500 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.12■□□□□ 0.01
Itm2aQ61500 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Itm2aQ61500 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.12■□□□□ 0.01
Itm2aQ61500 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Itm2aQ61500 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Itm2aQ61500 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Itm2aQ61500 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Itm2aQ61500 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Itm2aQ61500 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Itm2aQ61500 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Itm2aQ61500 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Itm2aQ61500 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Itm2aQ61500 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Itm2aQ61500 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Itm2aQ61500 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Itm2aQ61500 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Itm2aQ61500 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Itm2aQ61500 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Itm2aQ61500 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Itm2aQ61500 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Itm2aQ61500 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Itm2aQ61500 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Itm2aQ61500 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Itm2aQ61500 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Itm2aQ61500 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.11■□□□□ 0.01
Itm2aQ61500 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Itm2aQ61500 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.11■□□□□ 0.01
Itm2aQ61500 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.11■□□□□ 0.01
Itm2aQ61500 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Itm2aQ61500 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Itm2aQ61500 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Itm2aQ61500 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Itm2aQ61500 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Itm2aQ61500 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Itm2aQ61500 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Itm2aQ61500 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Itm2aQ61500 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.11■□□□□ 0.01
Itm2aQ61500 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Itm2aQ61500 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Itm2aQ61500 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Itm2aQ61500 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Itm2aQ61500 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Itm2aQ61500 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Itm2aQ61500 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
Itm2aQ61500 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Itm2aQ61500 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.1■□□□□ 0.01
Itm2aQ61500 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Itm2aQ61500 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.1■□□□□ 0.01
Itm2aQ61500 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Itm2aQ61500 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Itm2aQ61500 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.1■□□□□ 0.01
Itm2aQ61500 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.1■□□□□ 0.01
Itm2aQ61500 Gm25406-201ENSMUST00000157599 105 ntBASIC15.1■□□□□ 0.01
Itm2aQ61500 Gm6623-201ENSMUST00000173570 544 ntBASIC15.1■□□□□ 0.01
Itm2aQ61500 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.1■□□□□ 0.01
Itm2aQ61500 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Itm2aQ61500 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Itm2aQ61500 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Itm2aQ61500 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Itm2aQ61500 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Itm2aQ61500 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Itm2aQ61500 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Itm2aQ61500 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Itm2aQ61500 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Itm2aQ61500 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Itm2aQ61500 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Itm2aQ61500 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Itm2aQ61500 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Itm2aQ61500 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Itm2aQ61500 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Itm2aQ61500 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Itm2aQ61500 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Itm2aQ61500 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Itm2aQ61500 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.09■□□□□ 0.01
Itm2aQ61500 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Itm2aQ61500 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Itm2aQ61500 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.09■□□□□ 0.01
Itm2aQ61500 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Itm2aQ61500 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.09■□□□□ 0.01
Itm2aQ61500 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.09■□□□□ 0.01
Itm2aQ61500 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.09■□□□□ 0.01
Itm2aQ61500 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.09■□□□□ 0.01
Itm2aQ61500 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Itm2aQ61500 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Itm2aQ61500 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Itm2aQ61500 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Itm2aQ61500 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Itm2aQ61500 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Itm2aQ61500 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Itm2aQ61500 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Itm2aQ61500 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms