Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six4Q61321 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six4Q61321 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six4Q61321 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six4Q61321 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six4Q61321 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six4Q61321 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
Six4Q61321 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six4Q61321 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Six4Q61321 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Six4Q61321 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.47■□□□□ 0.07
Six4Q61321 Gm44771-201ENSMUST00000206975 626 ntBASIC15.47■□□□□ 0.07
Six4Q61321 Gm7787-201ENSMUST00000216858 688 ntBASIC15.47■□□□□ 0.07
Six4Q61321 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.47■□□□□ 0.07
Six4Q61321 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six4Q61321 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six4Q61321 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six4Q61321 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six4Q61321 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six4Q61321 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Six4Q61321 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six4Q61321 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.47■□□□□ 0.07
Six4Q61321 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six4Q61321 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Six4Q61321 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Six4Q61321 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Six4Q61321 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Six4Q61321 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Six4Q61321 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.46■□□□□ 0.07
Six4Q61321 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.46■□□□□ 0.07
Six4Q61321 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.46■□□□□ 0.07
Six4Q61321 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.46■□□□□ 0.07
Six4Q61321 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Six4Q61321 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Six4Q61321 Gm27300-201ENSMUST00000184085 97 ntBASIC15.46■□□□□ 0.07
Six4Q61321 Gm27335-201ENSMUST00000184758 97 ntBASIC15.46■□□□□ 0.07
Six4Q61321 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Six4Q61321 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.46■□□□□ 0.07
Six4Q61321 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Six4Q61321 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Six4Q61321 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Six4Q61321 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Six4Q61321 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Six4Q61321 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Six4Q61321 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Six4Q61321 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.46■□□□□ 0.07
Six4Q61321 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Six4Q61321 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.46■□□□□ 0.07
Six4Q61321 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Six4Q61321 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Six4Q61321 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Six4Q61321 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Six4Q61321 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Six4Q61321 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.45■□□□□ 0.06
Six4Q61321 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.45■□□□□ 0.06
Six4Q61321 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Six4Q61321 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Six4Q61321 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Six4Q61321 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Six4Q61321 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Six4Q61321 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Six4Q61321 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.45■□□□□ 0.06
Six4Q61321 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.45■□□□□ 0.06
Six4Q61321 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.45■□□□□ 0.06
Six4Q61321 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.45■□□□□ 0.06
Six4Q61321 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.45■□□□□ 0.06
Six4Q61321 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Six4Q61321 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Six4Q61321 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Six4Q61321 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Six4Q61321 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Six4Q61321 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Six4Q61321 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Six4Q61321 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Six4Q61321 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Six4Q61321 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Six4Q61321 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Six4Q61321 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Six4Q61321 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Six4Q61321 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Six4Q61321 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Six4Q61321 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Six4Q61321 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Six4Q61321 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Six4Q61321 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Six4Q61321 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Six4Q61321 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Six4Q61321 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Six4Q61321 Gm1401-201ENSMUST00000122048 772 ntBASIC15.44■□□□□ 0.06
Six4Q61321 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.44■□□□□ 0.06
Six4Q61321 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.44■□□□□ 0.06
Six4Q61321 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Six4Q61321 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
Six4Q61321 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.44■□□□□ 0.06
Six4Q61321 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Six4Q61321 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Six4Q61321 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Six4Q61321 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Six4Q61321 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Six4Q61321 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms