Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Col11a1Q61245 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col11a1Q61245 Gm46209-201ENSMUST00000217912 553 ntBASIC16.96■□□□□ 0.31
Col11a1Q61245 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.96■□□□□ 0.31
Col11a1Q61245 AC166349.1-201ENSMUST00000220866 695 ntBASIC16.96■□□□□ 0.31
Col11a1Q61245 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col11a1Q61245 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col11a1Q61245 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col11a1Q61245 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Col11a1Q61245 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col11a1Q61245 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Col11a1Q61245 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col11a1Q61245 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col11a1Q61245 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col11a1Q61245 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col11a1Q61245 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col11a1Q61245 Gm15678-201ENSMUST00000117573 960 ntBASIC16.96■□□□□ 0.3
Col11a1Q61245 Gm9229-201ENSMUST00000222777 126 ntBASIC16.96■□□□□ 0.3
Col11a1Q61245 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col11a1Q61245 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col11a1Q61245 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.96■□□□□ 0.3
Col11a1Q61245 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a1Q61245 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a1Q61245 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a1Q61245 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a1Q61245 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a1Q61245 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.95■□□□□ 0.3
Col11a1Q61245 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a1Q61245 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a1Q61245 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a1Q61245 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a1Q61245 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Col11a1Q61245 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.95■□□□□ 0.3
Col11a1Q61245 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a1Q61245 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Col11a1Q61245 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Col11a1Q61245 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a1Q61245 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a1Q61245 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a1Q61245 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a1Q61245 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a1Q61245 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a1Q61245 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Col11a1Q61245 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.94■□□□□ 0.3
Col11a1Q61245 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a1Q61245 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a1Q61245 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a1Q61245 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a1Q61245 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a1Q61245 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.94■□□□□ 0.3
Col11a1Q61245 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a1Q61245 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a1Q61245 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a1Q61245 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a1Q61245 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a1Q61245 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a1Q61245 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a1Q61245 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a1Q61245 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col11a1Q61245 Mir6420-201ENSMUST00000185032 102 ntBASIC16.93■□□□□ 0.3
Col11a1Q61245 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.93■□□□□ 0.3
Col11a1Q61245 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.93■□□□□ 0.3
Col11a1Q61245 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.93■□□□□ 0.3
Col11a1Q61245 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Col11a1Q61245 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.93■□□□□ 0.3
Col11a1Q61245 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col11a1Q61245 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col11a1Q61245 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col11a1Q61245 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Col11a1Q61245 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col11a1Q61245 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.93■□□□□ 0.3
Col11a1Q61245 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col11a1Q61245 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col11a1Q61245 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col11a1Q61245 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col11a1Q61245 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col11a1Q61245 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col11a1Q61245 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Col11a1Q61245 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Col11a1Q61245 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col11a1Q61245 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col11a1Q61245 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col11a1Q61245 Gm28760-201ENSMUST00000185995 736 ntBASIC16.93■□□□□ 0.3
Col11a1Q61245 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.93■□□□□ 0.3
Col11a1Q61245 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.93■□□□□ 0.3
Col11a1Q61245 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col11a1Q61245 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.93■□□□□ 0.3
Col11a1Q61245 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col11a1Q61245 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col11a1Q61245 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col11a1Q61245 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col11a1Q61245 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col11a1Q61245 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col11a1Q61245 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col11a1Q61245 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col11a1Q61245 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col11a1Q61245 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col11a1Q61245 Gm17150-201ENSMUST00000165577 381 ntBASIC16.92■□□□□ 0.3
Col11a1Q61245 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.92■□□□□ 0.3
Col11a1Q61245 Gm37917-201ENSMUST00000194711 392 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms