Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.42■□□□□ 0.54
Mre11Q61216 Gm37691-201ENSMUST00000192147 2573 ntBASIC18.42■□□□□ 0.54
Mre11Q61216 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mre11Q61216 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mre11Q61216 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC18.42■□□□□ 0.54
Mre11Q61216 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mre11Q61216 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mre11Q61216 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mre11Q61216 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.42■□□□□ 0.54
Mre11Q61216 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.42■□□□□ 0.54
Mre11Q61216 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mre11Q61216 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mre11Q61216 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Mre11Q61216 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mre11Q61216 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mre11Q61216 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mre11Q61216 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mre11Q61216 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mre11Q61216 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Mre11Q61216 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mre11Q61216 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mre11Q61216 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Mre11Q61216 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mre11Q61216 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Mre11Q61216 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mre11Q61216 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mre11Q61216 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mre11Q61216 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mre11Q61216 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mre11Q61216 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC18.41■□□□□ 0.54
Mre11Q61216 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mre11Q61216 Gm5643-201ENSMUST00000117081 966 ntBASIC18.41■□□□□ 0.54
Mre11Q61216 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Mre11Q61216 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Mre11Q61216 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Mre11Q61216 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.41■□□□□ 0.54
Mre11Q61216 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.41■□□□□ 0.54
Mre11Q61216 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mre11Q61216 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Mre11Q61216 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC18.41■□□□□ 0.54
Mre11Q61216 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mre11Q61216 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Mre11Q61216 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mre11Q61216 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mre11Q61216 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mre11Q61216 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.41■□□□□ 0.54
Mre11Q61216 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Mre11Q61216 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mre11Q61216 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Mre11Q61216 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC18.41■□□□□ 0.54
Mre11Q61216 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Mre11Q61216 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mre11Q61216 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mre11Q61216 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mre11Q61216 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Mre11Q61216 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Mre11Q61216 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.4■□□□□ 0.54
Mre11Q61216 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.4■□□□□ 0.54
Mre11Q61216 Mir6404-201ENSMUST00000183699 94 ntBASIC18.4■□□□□ 0.54
Mre11Q61216 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.4■□□□□ 0.54
Mre11Q61216 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.4■□□□□ 0.54
Mre11Q61216 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mre11Q61216 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mre11Q61216 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mre11Q61216 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mre11Q61216 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mre11Q61216 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Mre11Q61216 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Mre11Q61216 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mre11Q61216 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mre11Q61216 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mre11Q61216 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mre11Q61216 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mre11Q61216 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mre11Q61216 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mre11Q61216 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.39■□□□□ 0.53
Mre11Q61216 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.39■□□□□ 0.53
Mre11Q61216 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mre11Q61216 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.39■□□□□ 0.53
Mre11Q61216 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mre11Q61216 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.39■□□□□ 0.53
Mre11Q61216 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mre11Q61216 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mre11Q61216 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Mre11Q61216 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Mre11Q61216 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mre11Q61216 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Mre11Q61216 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mre11Q61216 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mre11Q61216 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mre11Q61216 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mre11Q61216 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mre11Q61216 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mre11Q61216 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mre11Q61216 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Mre11Q61216 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mre11Q61216 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Mre11Q61216 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mre11Q61216 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.38■□□□□ 0.53
Mre11Q61216 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms