Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a4Q60857 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a4Q60857 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a4Q60857 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.69■□□□□ 0.1
Slc6a4Q60857 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.69■□□□□ 0.1
Slc6a4Q60857 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a4Q60857 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a4Q60857 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a4Q60857 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Slc6a4Q60857 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.68■□□□□ 0.1
Slc6a4Q60857 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Slc6a4Q60857 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Slc6a4Q60857 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a4Q60857 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a4Q60857 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.68■□□□□ 0.1
Slc6a4Q60857 Gm12008-201ENSMUST00000117791 755 ntBASIC15.68■□□□□ 0.1
Slc6a4Q60857 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a4Q60857 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Slc6a4Q60857 Thap2-203ENSMUST00000218989 527 ntBASIC15.68■□□□□ 0.1
Slc6a4Q60857 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Slc6a4Q60857 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a4Q60857 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a4Q60857 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a4Q60857 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a4Q60857 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a4Q60857 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a4Q60857 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a4Q60857 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc6a4Q60857 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a4Q60857 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a4Q60857 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Slc6a4Q60857 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Slc6a4Q60857 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a4Q60857 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a4Q60857 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a4Q60857 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a4Q60857 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a4Q60857 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a4Q60857 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a4Q60857 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a4Q60857 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a4Q60857 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Slc6a4Q60857 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.67■□□□□ 0.1
Slc6a4Q60857 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.67■□□□□ 0.1
Slc6a4Q60857 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a4Q60857 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a4Q60857 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a4Q60857 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a4Q60857 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a4Q60857 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.67■□□□□ 0.1
Slc6a4Q60857 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.67■□□□□ 0.1
Slc6a4Q60857 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc6a4Q60857 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Slc6a4Q60857 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a4Q60857 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Slc6a4Q60857 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a4Q60857 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a4Q60857 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a4Q60857 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a4Q60857 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a4Q60857 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Slc6a4Q60857 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Slc6a4Q60857 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Slc6a4Q60857 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a4Q60857 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a4Q60857 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a4Q60857 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a4Q60857 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a4Q60857 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a4Q60857 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Slc6a4Q60857 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a4Q60857 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc6a4Q60857 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a4Q60857 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a4Q60857 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a4Q60857 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a4Q60857 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a4Q60857 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a4Q60857 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a4Q60857 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a4Q60857 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a4Q60857 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a4Q60857 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.65■□□□□ 0.1
Slc6a4Q60857 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Slc6a4Q60857 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.65■□□□□ 0.1
Slc6a4Q60857 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a4Q60857 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.65■□□□□ 0.1
Slc6a4Q60857 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.65■□□□□ 0.1
Slc6a4Q60857 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.65■□□□□ 0.1
Slc6a4Q60857 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a4Q60857 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a4Q60857 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.65■□□□□ 0.1
Slc6a4Q60857 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a4Q60857 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a4Q60857 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a4Q60857 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a4Q60857 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a4Q60857 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a4Q60857 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc6a4Q60857 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms