Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5d-4Q5R1F6 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5d-4Q5R1F6 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5d-4Q5R1F6 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5d-4Q5R1F6 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5d-4Q5R1F6 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5d-4Q5R1F6 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5d-4Q5R1F6 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav5d-4Q5R1F6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav5d-4Q5R1F6 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5d-4Q5R1F6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5d-4Q5R1F6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5d-4Q5R1F6 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5d-4Q5R1F6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5d-4Q5R1F6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5d-4Q5R1F6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5d-4Q5R1F6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav5d-4Q5R1F6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5d-4Q5R1F6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5d-4Q5R1F6 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5d-4Q5R1F6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav5d-4Q5R1F6 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5d-4Q5R1F6 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5d-4Q5R1F6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav5d-4Q5R1F6 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5d-4Q5R1F6 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5d-4Q5R1F6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5d-4Q5R1F6 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav5d-4Q5R1F6 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav5d-4Q5R1F6 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5d-4Q5R1F6 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5d-4Q5R1F6 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav5d-4Q5R1F6 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5d-4Q5R1F6 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5d-4Q5R1F6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5d-4Q5R1F6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5d-4Q5R1F6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5d-4Q5R1F6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5d-4Q5R1F6 Gm8344-201ENSMUST00000119813 856 ntBASIC13.21□□□□□ -0.29
Trav5d-4Q5R1F6 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav5d-4Q5R1F6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5d-4Q5R1F6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5d-4Q5R1F6 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5d-4Q5R1F6 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5d-4Q5R1F6 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5d-4Q5R1F6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5d-4Q5R1F6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav5d-4Q5R1F6 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav5d-4Q5R1F6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav5d-4Q5R1F6 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav5d-4Q5R1F6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Trav5d-4Q5R1F6 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.21□□□□□ -0.3
Trav5d-4Q5R1F6 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav5d-4Q5R1F6 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav5d-4Q5R1F6 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav5d-4Q5R1F6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Trav5d-4Q5R1F6 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav5d-4Q5R1F6 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.21□□□□□ -0.3
Trav5d-4Q5R1F6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav5d-4Q5R1F6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Gm8097-201ENSMUST00000117903 829 ntBASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Gm28033-201ENSMUST00000184224 96 ntBASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms