Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav6-3Q5R1E6 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Trav6-3Q5R1E6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 Gm4459-201ENSMUST00000118750 468 ntBASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 Gm15372-201ENSMUST00000120729 834 ntBASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-3Q5R1E6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms