Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-3Q5R1C3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Trav3-3Q5R1C3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms