Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim41Q5NCC3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim41Q5NCC3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim41Q5NCC3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
Trim41Q5NCC3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim41Q5NCC3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim41Q5NCC3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim41Q5NCC3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim41Q5NCC3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim41Q5NCC3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC26.51■■□□□ 1.83
Trim41Q5NCC3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Trim41Q5NCC3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim41Q5NCC3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Trim41Q5NCC3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Trim41Q5NCC3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim41Q5NCC3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim41Q5NCC3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC26.51■■□□□ 1.83
Trim41Q5NCC3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trim41Q5NCC3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Trim41Q5NCC3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trim41Q5NCC3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC26.5■■□□□ 1.83
Trim41Q5NCC3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC26.5■■□□□ 1.83
Trim41Q5NCC3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
Trim41Q5NCC3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Trim41Q5NCC3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC26.5■■□□□ 1.83
Trim41Q5NCC3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC26.5■■□□□ 1.83
Trim41Q5NCC3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC26.5■■□□□ 1.83
Trim41Q5NCC3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC26.5■■□□□ 1.83
Trim41Q5NCC3 CT025555.1-201ENSMUST00000225901 1217 ntBASIC26.5■■□□□ 1.83
Trim41Q5NCC3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trim41Q5NCC3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Trim41Q5NCC3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trim41Q5NCC3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trim41Q5NCC3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trim41Q5NCC3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Trim41Q5NCC3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Trim41Q5NCC3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC26.49■■□□□ 1.83
Trim41Q5NCC3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
Trim41Q5NCC3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Trim41Q5NCC3 Gm14928-201ENSMUST00000120198 477 ntBASIC26.49■■□□□ 1.83
Trim41Q5NCC3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Trim41Q5NCC3 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Trim41Q5NCC3 Gm7730-201ENSMUST00000212486 454 ntBASIC26.49■■□□□ 1.83
Trim41Q5NCC3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Trim41Q5NCC3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Trim41Q5NCC3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Trim41Q5NCC3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
Trim41Q5NCC3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Trim41Q5NCC3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim41Q5NCC3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC26.48■■□□□ 1.83
Trim41Q5NCC3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim41Q5NCC3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Trim41Q5NCC3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC26.48■■□□□ 1.83
Trim41Q5NCC3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim41Q5NCC3 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim41Q5NCC3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC26.48■■□□□ 1.83
Trim41Q5NCC3 Mir8102-201ENSMUST00000184148 139 ntBASIC26.48■■□□□ 1.83
Trim41Q5NCC3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC26.48■■□□□ 1.83
Trim41Q5NCC3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Trim41Q5NCC3 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC26.48■■□□□ 1.83
Trim41Q5NCC3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Trim41Q5NCC3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim41Q5NCC3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC26.48■■□□□ 1.83
Trim41Q5NCC3 Gm10154-201ENSMUST00000084445 354 ntBASIC26.48■■□□□ 1.83
Trim41Q5NCC3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim41Q5NCC3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim41Q5NCC3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim41Q5NCC3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Trim41Q5NCC3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim41Q5NCC3 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim41Q5NCC3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim41Q5NCC3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trim41Q5NCC3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC26.47■■□□□ 1.83
Trim41Q5NCC3 Gm20628-201ENSMUST00000177363 3215 ntBASIC26.47■■□□□ 1.83
Trim41Q5NCC3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
Trim41Q5NCC3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trim41Q5NCC3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Trim41Q5NCC3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Trim41Q5NCC3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC26.47■■□□□ 1.83
Trim41Q5NCC3 Gm6473-201ENSMUST00000188572 1210 ntBASIC26.47■■□□□ 1.83
Trim41Q5NCC3 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC26.47■■□□□ 1.83
Trim41Q5NCC3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC26.47■■□□□ 1.83
Trim41Q5NCC3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trim41Q5NCC3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trim41Q5NCC3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trim41Q5NCC3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trim41Q5NCC3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trim41Q5NCC3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
Trim41Q5NCC3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trim41Q5NCC3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Trim41Q5NCC3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Trim41Q5NCC3 Nudt18-203ENSMUST00000228768 1578 ntBASIC26.46■■□□□ 1.83
Trim41Q5NCC3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC26.46■■□□□ 1.83
Trim41Q5NCC3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC26.46■■□□□ 1.83
Trim41Q5NCC3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim41Q5NCC3 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim41Q5NCC3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim41Q5NCC3 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC26.46■■□□□ 1.83
Trim41Q5NCC3 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Trim41Q5NCC3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC26.46■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms