Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm44466-201ENSMUST00000200264 138 ntBASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Gm44359-201ENSMUST00000200671 138 ntBASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Gm24589-201ENSMUST00000116692 94 ntBASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf20Q5DTM8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf20Q5DTM8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Rnf20Q5DTM8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Rnf20Q5DTM8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.27■□□□□ 0.52
Rnf20Q5DTM8 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf20Q5DTM8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf20Q5DTM8 Gm13418-201ENSMUST00000119097 944 ntBASIC18.27■□□□□ 0.52
Rnf20Q5DTM8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.27■□□□□ 0.52
Rnf20Q5DTM8 Gm10819-201ENSMUST00000099988 561 ntBASIC18.27■□□□□ 0.52
Rnf20Q5DTM8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf20Q5DTM8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf20Q5DTM8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf20Q5DTM8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Rnf20Q5DTM8 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rnf20Q5DTM8 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Rnf20Q5DTM8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rnf20Q5DTM8 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Rnf20Q5DTM8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rnf20Q5DTM8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf20Q5DTM8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf20Q5DTM8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.25■□□□□ 0.51
Rnf20Q5DTM8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf20Q5DTM8 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.25■□□□□ 0.51
Rnf20Q5DTM8 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf20Q5DTM8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rnf20Q5DTM8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf20Q5DTM8 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms