Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scn2bQ56A07 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn2bQ56A07 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn2bQ56A07 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn2bQ56A07 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn2bQ56A07 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn2bQ56A07 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.19■□□□□ 0.02
Scn2bQ56A07 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Scn2bQ56A07 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn2bQ56A07 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn2bQ56A07 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.19■□□□□ 0.02
Scn2bQ56A07 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn2bQ56A07 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn2bQ56A07 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scn2bQ56A07 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn2bQ56A07 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scn2bQ56A07 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Scn2bQ56A07 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn2bQ56A07 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.18■□□□□ 0.02
Scn2bQ56A07 Gm12895-201ENSMUST00000122214 226 ntBASIC15.18■□□□□ 0.02
Scn2bQ56A07 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.18■□□□□ 0.02
Scn2bQ56A07 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.18■□□□□ 0.02
Scn2bQ56A07 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn2bQ56A07 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Scn2bQ56A07 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn2bQ56A07 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scn2bQ56A07 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn2bQ56A07 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.17■□□□□ 0.02
Scn2bQ56A07 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn2bQ56A07 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn2bQ56A07 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn2bQ56A07 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Scn2bQ56A07 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn2bQ56A07 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn2bQ56A07 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scn2bQ56A07 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scn2bQ56A07 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.17■□□□□ 0.02
Scn2bQ56A07 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.17■□□□□ 0.02
Scn2bQ56A07 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.17■□□□□ 0.02
Scn2bQ56A07 Gm44454-201ENSMUST00000198541 138 ntBASIC15.17■□□□□ 0.02
Scn2bQ56A07 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn2bQ56A07 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn2bQ56A07 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Scn2bQ56A07 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Scn2bQ56A07 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn2bQ56A07 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.17■□□□□ 0.02
Scn2bQ56A07 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scn2bQ56A07 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Scn2bQ56A07 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn2bQ56A07 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn2bQ56A07 Grk6-207ENSMUST00000225925 2769 ntBASIC15.16■□□□□ 0.02
Scn2bQ56A07 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn2bQ56A07 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Scn2bQ56A07 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn2bQ56A07 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn2bQ56A07 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.16■□□□□ 0.02
Scn2bQ56A07 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn2bQ56A07 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.16■□□□□ 0.02
Scn2bQ56A07 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn2bQ56A07 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.16■□□□□ 0.02
Scn2bQ56A07 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn2bQ56A07 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn2bQ56A07 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn2bQ56A07 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn2bQ56A07 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn2bQ56A07 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn2bQ56A07 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Scn2bQ56A07 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn2bQ56A07 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms