Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syne3Q4FZC9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syne3Q4FZC9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Syne3Q4FZC9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syne3Q4FZC9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syne3Q4FZC9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syne3Q4FZC9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syne3Q4FZC9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Syne3Q4FZC9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syne3Q4FZC9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syne3Q4FZC9 Gm8097-201ENSMUST00000117903 829 ntBASIC16.3■□□□□ 0.2
Syne3Q4FZC9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Syne3Q4FZC9 Gm5864-201ENSMUST00000202263 970 ntBASIC16.3■□□□□ 0.2
Syne3Q4FZC9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.3■□□□□ 0.2
Syne3Q4FZC9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Syne3Q4FZC9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syne3Q4FZC9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syne3Q4FZC9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syne3Q4FZC9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Syne3Q4FZC9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Syne3Q4FZC9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syne3Q4FZC9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syne3Q4FZC9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Syne3Q4FZC9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syne3Q4FZC9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syne3Q4FZC9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syne3Q4FZC9 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.29■□□□□ 0.2
Syne3Q4FZC9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syne3Q4FZC9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syne3Q4FZC9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Syne3Q4FZC9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.29■□□□□ 0.2
Syne3Q4FZC9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.29■□□□□ 0.2
Syne3Q4FZC9 Gm18622-201ENSMUST00000219361 595 ntBASIC16.29■□□□□ 0.2
Syne3Q4FZC9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syne3Q4FZC9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Syne3Q4FZC9 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.29■□□□□ 0.2
Syne3Q4FZC9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Syne3Q4FZC9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syne3Q4FZC9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syne3Q4FZC9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Syne3Q4FZC9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syne3Q4FZC9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syne3Q4FZC9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syne3Q4FZC9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syne3Q4FZC9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syne3Q4FZC9 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syne3Q4FZC9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.29■□□□□ 0.2
Syne3Q4FZC9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syne3Q4FZC9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Syne3Q4FZC9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Gm11452-201ENSMUST00000122376 690 ntBASIC16.28■□□□□ 0.2
Syne3Q4FZC9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Gm4535-201ENSMUST00000182274 558 ntBASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Gm10355-201ENSMUST00000097146 517 ntBASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne3Q4FZC9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Syne3Q4FZC9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syne3Q4FZC9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syne3Q4FZC9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syne3Q4FZC9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syne3Q4FZC9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syne3Q4FZC9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syne3Q4FZC9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.27■□□□□ 0.2
Syne3Q4FZC9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.27■□□□□ 0.2
Syne3Q4FZC9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
Syne3Q4FZC9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Syne3Q4FZC9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.27■□□□□ 0.2
Syne3Q4FZC9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms