Protein–RNA interactions for Protein: Q3UZ39

Lrrfip1, Leucine-rich repeat flightless-interacting protein 1, mousemouse

Known RBP Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrfip1Q3UZ39 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrrfip1Q3UZ39 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Lrrfip1Q3UZ39 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lrrfip1Q3UZ39 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrrfip1Q3UZ39 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrrfip1Q3UZ39 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrrfip1Q3UZ39 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrrfip1Q3UZ39 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrrfip1Q3UZ39 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Lrrfip1Q3UZ39 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrrfip1Q3UZ39 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrrfip1Q3UZ39 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Gm37153-201ENSMUST00000193637 231 ntBASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrrfip1Q3UZ39 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrfip1Q3UZ39 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrfip1Q3UZ39 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrfip1Q3UZ39 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrfip1Q3UZ39 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrfip1Q3UZ39 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrfip1Q3UZ39 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrfip1Q3UZ39 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrfip1Q3UZ39 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.42■□□□□ 0.38
Lrrfip1Q3UZ39 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrfip1Q3UZ39 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrfip1Q3UZ39 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrfip1Q3UZ39 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrfip1Q3UZ39 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrfip1Q3UZ39 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrfip1Q3UZ39 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrfip1Q3UZ39 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrfip1Q3UZ39 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Lrrfip1Q3UZ39 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrfip1Q3UZ39 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrfip1Q3UZ39 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrrfip1Q3UZ39 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrrfip1Q3UZ39 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrrfip1Q3UZ39 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.41■□□□□ 0.38
Lrrfip1Q3UZ39 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrrfip1Q3UZ39 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.41■□□□□ 0.38
Lrrfip1Q3UZ39 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Lrrfip1Q3UZ39 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Lrrfip1Q3UZ39 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrrfip1Q3UZ39 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrrfip1Q3UZ39 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrrfip1Q3UZ39 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.41■□□□□ 0.38
Lrrfip1Q3UZ39 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.41■□□□□ 0.38
Lrrfip1Q3UZ39 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Lrrfip1Q3UZ39 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.41■□□□□ 0.38
Lrrfip1Q3UZ39 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Lrrfip1Q3UZ39 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Lrrfip1Q3UZ39 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lrrfip1Q3UZ39 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Lrrfip1Q3UZ39 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrrfip1Q3UZ39 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrrfip1Q3UZ39 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrrfip1Q3UZ39 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Lrrfip1Q3UZ39 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrrfip1Q3UZ39 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrrfip1Q3UZ39 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrrfip1Q3UZ39 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrrfip1Q3UZ39 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrrfip1Q3UZ39 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrrfip1Q3UZ39 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lrrfip1Q3UZ39 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.4■□□□□ 0.38
Lrrfip1Q3UZ39 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrrfip1Q3UZ39 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrrfip1Q3UZ39 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrrfip1Q3UZ39 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms