Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Gm15427-201ENSMUST00000117288 531 ntBASIC14.85□□□□□ -0.03
Rnf223Q3UV31 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.85□□□□□ -0.03
Rnf223Q3UV31 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf223Q3UV31 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf223Q3UV31 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf223Q3UV31 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC14.85□□□□□ -0.03
Rnf223Q3UV31 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf223Q3UV31 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf223Q3UV31 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf223Q3UV31 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf223Q3UV31 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf223Q3UV31 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf223Q3UV31 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf223Q3UV31 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf223Q3UV31 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf223Q3UV31 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rnf223Q3UV31 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Gm16198-201ENSMUST00000118766 670 ntBASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rnf223Q3UV31 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf223Q3UV31 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf223Q3UV31 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.83□□□□□ -0.03
Rnf223Q3UV31 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf223Q3UV31 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf223Q3UV31 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.83□□□□□ -0.04
Rnf223Q3UV31 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Chchd1-203ENSMUST00000224633 557 ntBASIC14.83□□□□□ -0.04
Rnf223Q3UV31 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.83□□□□□ -0.04
Rnf223Q3UV31 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms