Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.36■□□□□ 0.05
Fam196aQ3USH1 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Fam196aQ3USH1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Fam196aQ3USH1 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Fam196aQ3USH1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Fam196aQ3USH1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.36■□□□□ 0.05
Fam196aQ3USH1 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Fam196aQ3USH1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Fam196aQ3USH1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Fam196aQ3USH1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Fam196aQ3USH1 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Fam196aQ3USH1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Fam196aQ3USH1 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Fam196aQ3USH1 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Fam196aQ3USH1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Fam196aQ3USH1 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Fam196aQ3USH1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.35■□□□□ 0.05
Fam196aQ3USH1 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
Fam196aQ3USH1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Fam196aQ3USH1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Fam196aQ3USH1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Fam196aQ3USH1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Fam196aQ3USH1 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.35■□□□□ 0.05
Fam196aQ3USH1 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.35■□□□□ 0.05
Fam196aQ3USH1 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Fam196aQ3USH1 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.35■□□□□ 0.05
Fam196aQ3USH1 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.35■□□□□ 0.05
Fam196aQ3USH1 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.35■□□□□ 0.05
Fam196aQ3USH1 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Fam196aQ3USH1 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Fam196aQ3USH1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.35■□□□□ 0.05
Fam196aQ3USH1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Fam196aQ3USH1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Fam196aQ3USH1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Fam196aQ3USH1 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Fam196aQ3USH1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Fam196aQ3USH1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Fam196aQ3USH1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Fam196aQ3USH1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Gm29667-201ENSMUST00000190817 490 ntBASIC15.34■□□□□ 0.05
Fam196aQ3USH1 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fam196aQ3USH1 Asic1-205ENSMUST00000228185 1818 ntBASIC15.33■□□□□ 0.05
Fam196aQ3USH1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.33■□□□□ 0.05
Fam196aQ3USH1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Fam196aQ3USH1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Fam196aQ3USH1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fam196aQ3USH1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fam196aQ3USH1 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fam196aQ3USH1 Gm6266-201ENSMUST00000203844 806 ntBASIC15.33■□□□□ 0.04
Fam196aQ3USH1 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.33■□□□□ 0.04
Fam196aQ3USH1 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fam196aQ3USH1 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Fam196aQ3USH1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Fam196aQ3USH1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fam196aQ3USH1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Fam196aQ3USH1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fam196aQ3USH1 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.33■□□□□ 0.04
Fam196aQ3USH1 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Fam196aQ3USH1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fam196aQ3USH1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fam196aQ3USH1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Fam196aQ3USH1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fam196aQ3USH1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.33■□□□□ 0.04
Fam196aQ3USH1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.33■□□□□ 0.04
Fam196aQ3USH1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam196aQ3USH1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam196aQ3USH1 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam196aQ3USH1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam196aQ3USH1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam196aQ3USH1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Fam196aQ3USH1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam196aQ3USH1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fam196aQ3USH1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms