Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf149Q3U2C5 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf149Q3U2C5 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf149Q3U2C5 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf149Q3U2C5 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf149Q3U2C5 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Rnf149Q3U2C5 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.84□□□□□ -0.19
Rnf149Q3U2C5 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf149Q3U2C5 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Rnf149Q3U2C5 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rnf149Q3U2C5 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.83□□□□□ -0.19
Rnf149Q3U2C5 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rnf149Q3U2C5 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf149Q3U2C5 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Gm27704-201ENSMUST00000185094 107 ntBASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf149Q3U2C5 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Rnf149Q3U2C5 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf149Q3U2C5 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.81□□□□□ -0.2
Rnf149Q3U2C5 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf149Q3U2C5 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf149Q3U2C5 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf149Q3U2C5 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf149Q3U2C5 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf149Q3U2C5 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.81□□□□□ -0.2
Rnf149Q3U2C5 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf149Q3U2C5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.81□□□□□ -0.2
Rnf149Q3U2C5 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Rnf149Q3U2C5 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf149Q3U2C5 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf149Q3U2C5 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf149Q3U2C5 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rnf149Q3U2C5 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.81□□□□□ -0.2
Rnf149Q3U2C5 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rnf149Q3U2C5 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf149Q3U2C5 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.81□□□□□ -0.2
Rnf149Q3U2C5 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf149Q3U2C5 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf149Q3U2C5 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf149Q3U2C5 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf149Q3U2C5 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms