Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm6334-201ENSMUST00000207083 228 ntBASIC8.05□□□□□ -1.12
Ush2AQ2QI47 AC069562.2-201ENSMUST00000224644 2146 ntBASIC8.05□□□□□ -1.12
Ush2AQ2QI47 AC149588.3-201ENSMUST00000227515 150 ntBASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Gm27631-201ENSMUST00000184163 466 ntBASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 AC156560.2-201ENSMUST00000221232 264 ntBASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Gm6756-201ENSMUST00000180647 1620 ntBASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Ush2AQ2QI47 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 AC133598.1-201ENSMUST00000224327 660 ntBASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Gm12201-201ENSMUST00000120657 1234 ntBASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Gm5051-201ENSMUST00000204085 485 ntBASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ush2AQ2QI47 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 AC165157.4-201ENSMUST00000220587 139 ntBASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Gm45453-201ENSMUST00000211758 853 ntBASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Gm14452-201ENSMUST00000118680 1632 ntBASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Gm16177-201ENSMUST00000120728 718 ntBASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Gm7118-201ENSMUST00000200167 1003 ntBASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Gm8285-201ENSMUST00000208293 759 ntBASIC8.03□□□□□ -1.12
Ush2AQ2QI47 AC140293.1-201ENSMUST00000225626 1247 ntBASIC8.03□□□□□ -1.12
Ush2AQ2QI47 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms