Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tff1Q08423 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tff1Q08423 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tff1Q08423 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tff1Q08423 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tff1Q08423 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tff1Q08423 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tff1Q08423 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tff1Q08423 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tff1Q08423 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tff1Q08423 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.78□□□□□ -0.36
Tff1Q08423 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tff1Q08423 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tff1Q08423 Gm11452-201ENSMUST00000122376 690 ntBASIC12.78□□□□□ -0.36
Tff1Q08423 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tff1Q08423 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tff1Q08423 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.78□□□□□ -0.36
Tff1Q08423 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.78□□□□□ -0.36
Tff1Q08423 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tff1Q08423 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.78□□□□□ -0.36
Tff1Q08423 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.78□□□□□ -0.36
Tff1Q08423 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.78□□□□□ -0.36
Tff1Q08423 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tff1Q08423 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tff1Q08423 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tff1Q08423 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tff1Q08423 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tff1Q08423 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tff1Q08423 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.78□□□□□ -0.36
Tff1Q08423 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tff1Q08423 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tff1Q08423 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tff1Q08423 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Tff1Q08423 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tff1Q08423 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tff1Q08423 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tff1Q08423 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tff1Q08423 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Tff1Q08423 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tff1Q08423 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tff1Q08423 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tff1Q08423 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Tff1Q08423 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.77□□□□□ -0.37
Tff1Q08423 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.77□□□□□ -0.37
Tff1Q08423 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tff1Q08423 Gm18195-201ENSMUST00000207604 706 ntBASIC12.77□□□□□ -0.37
Tff1Q08423 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tff1Q08423 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tff1Q08423 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.77□□□□□ -0.37
Tff1Q08423 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tff1Q08423 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tff1Q08423 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tff1Q08423 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tff1Q08423 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Tff1Q08423 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.77□□□□□ -0.37
Tff1Q08423 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tff1Q08423 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.76□□□□□ -0.37
Tff1Q08423 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tff1Q08423 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tff1Q08423 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tff1Q08423 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Tff1Q08423 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tff1Q08423 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tff1Q08423 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tff1Q08423 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tff1Q08423 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tff1Q08423 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Tff1Q08423 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tff1Q08423 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tff1Q08423 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tff1Q08423 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.76□□□□□ -0.37
Tff1Q08423 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tff1Q08423 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tff1Q08423 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tff1Q08423 Gm12895-201ENSMUST00000122214 226 ntBASIC12.76□□□□□ -0.37
Tff1Q08423 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tff1Q08423 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tff1Q08423 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Tff1Q08423 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.76□□□□□ -0.37
Tff1Q08423 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Tff1Q08423 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tff1Q08423 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Tff1Q08423 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tff1Q08423 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tff1Q08423 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tff1Q08423 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tff1Q08423 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Tff1Q08423 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tff1Q08423 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Tff1Q08423 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Tff1Q08423 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tff1Q08423 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tff1Q08423 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tff1Q08423 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tff1Q08423 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.75□□□□□ -0.37
Tff1Q08423 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.75□□□□□ -0.37
Tff1Q08423 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tff1Q08423 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tff1Q08423 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.75□□□□□ -0.37
Tff1Q08423 Gm18206-201ENSMUST00000207027 926 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms