Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hspg2Q05793 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Hspg2Q05793 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hspg2Q05793 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hspg2Q05793 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Hspg2Q05793 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC11.18□□□□□ -0.62
Hspg2Q05793 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hspg2Q05793 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.18□□□□□ -0.62
Hspg2Q05793 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hspg2Q05793 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hspg2Q05793 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hspg2Q05793 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Hspg2Q05793 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.17□□□□□ -0.62
Hspg2Q05793 Gm27838-201ENSMUST00000184829 128 ntBASIC11.17□□□□□ -0.62
Hspg2Q05793 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.17□□□□□ -0.62
Hspg2Q05793 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hspg2Q05793 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hspg2Q05793 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hspg2Q05793 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hspg2Q05793 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hspg2Q05793 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Hspg2Q05793 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hspg2Q05793 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Hspg2Q05793 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hspg2Q05793 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC11.17□□□□□ -0.62
Hspg2Q05793 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hspg2Q05793 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hspg2Q05793 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.17□□□□□ -0.62
Hspg2Q05793 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.17□□□□□ -0.62
Hspg2Q05793 Gm8515-201ENSMUST00000194852 576 ntBASIC11.17□□□□□ -0.62
Hspg2Q05793 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hspg2Q05793 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hspg2Q05793 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hspg2Q05793 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hspg2Q05793 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hspg2Q05793 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hspg2Q05793 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hspg2Q05793 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hspg2Q05793 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Hspg2Q05793 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.17□□□□□ -0.62
Hspg2Q05793 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.17□□□□□ -0.62
Hspg2Q05793 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hspg2Q05793 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.17□□□□□ -0.62
Hspg2Q05793 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.16□□□□□ -0.62
Hspg2Q05793 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.16□□□□□ -0.62
Hspg2Q05793 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Hspg2Q05793 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Hspg2Q05793 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.16□□□□□ -0.62
Hspg2Q05793 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.16□□□□□ -0.62
Hspg2Q05793 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hspg2Q05793 Gm18049-201ENSMUST00000208909 581 ntBASIC11.16□□□□□ -0.62
Hspg2Q05793 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.16□□□□□ -0.62
Hspg2Q05793 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.16□□□□□ -0.62
Hspg2Q05793 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hspg2Q05793 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.15□□□□□ -0.62
Hspg2Q05793 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.15□□□□□ -0.62
Hspg2Q05793 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hspg2Q05793 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Hspg2Q05793 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hspg2Q05793 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hspg2Q05793 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hspg2Q05793 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hspg2Q05793 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.15□□□□□ -0.62
Hspg2Q05793 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC11.15□□□□□ -0.62
Hspg2Q05793 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hspg2Q05793 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hspg2Q05793 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hspg2Q05793 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hspg2Q05793 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hspg2Q05793 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hspg2Q05793 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hspg2Q05793 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hspg2Q05793 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hspg2Q05793 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Hspg2Q05793 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms