Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a1Q05722 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a1Q05722 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a1Q05722 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a1Q05722 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a1Q05722 Gm15808-201ENSMUST00000119046 604 ntBASIC14.99□□□□□ -0.01
Col9a1Q05722 Gm19080-201ENSMUST00000196082 550 ntBASIC14.99□□□□□ -0.01
Col9a1Q05722 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a1Q05722 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a1Q05722 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a1Q05722 Gm5356-201ENSMUST00000093326 615 ntBASIC14.99□□□□□ -0.01
Col9a1Q05722 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a1Q05722 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a1Q05722 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a1Q05722 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Col9a1Q05722 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a1Q05722 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a1Q05722 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.98□□□□□ -0.01
Col9a1Q05722 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Col9a1Q05722 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a1Q05722 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.98□□□□□ -0.01
Col9a1Q05722 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Col9a1Q05722 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a1Q05722 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a1Q05722 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a1Q05722 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Col9a1Q05722 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a1Q05722 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a1Q05722 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Col9a1Q05722 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a1Q05722 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a1Q05722 Gm4993-201ENSMUST00000118719 1174 ntBASIC14.98□□□□□ -0.01
Col9a1Q05722 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.98□□□□□ -0.01
Col9a1Q05722 Gm21147-201ENSMUST00000186046 913 ntBASIC14.98□□□□□ -0.01
Col9a1Q05722 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.98□□□□□ -0.01
Col9a1Q05722 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.98□□□□□ -0.01
Col9a1Q05722 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a1Q05722 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Col9a1Q05722 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Col9a1Q05722 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a1Q05722 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a1Q05722 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Col9a1Q05722 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a1Q05722 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a1Q05722 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a1Q05722 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a1Q05722 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a1Q05722 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a1Q05722 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.97□□□□□ -0.01
Col9a1Q05722 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Col9a1Q05722 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Col9a1Q05722 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a1Q05722 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a1Q05722 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC14.97□□□□□ -0.01
Col9a1Q05722 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.97□□□□□ -0.01
Col9a1Q05722 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col9a1Q05722 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a1Q05722 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.97□□□□□ -0.01
Col9a1Q05722 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a1Q05722 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.97□□□□□ -0.01
Col9a1Q05722 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.97□□□□□ -0.01
Col9a1Q05722 AC155266.1-201ENSMUST00000220762 904 ntBASIC14.97□□□□□ -0.01
Col9a1Q05722 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.97□□□□□ -0.01
Col9a1Q05722 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a1Q05722 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a1Q05722 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a1Q05722 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a1Q05722 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a1Q05722 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a1Q05722 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a1Q05722 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a1Q05722 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col9a1Q05722 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Col9a1Q05722 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col9a1Q05722 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col9a1Q05722 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col9a1Q05722 Gm14660-201ENSMUST00000119809 575 ntBASIC14.96□□□□□ -0.01
Col9a1Q05722 Gm13350-201ENSMUST00000120519 479 ntBASIC14.96□□□□□ -0.01
Col9a1Q05722 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col9a1Q05722 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col9a1Q05722 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.96□□□□□ -0.01
Col9a1Q05722 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col9a1Q05722 Gm27701-201ENSMUST00000184498 110 ntBASIC14.96□□□□□ -0.01
Col9a1Q05722 Gm28911-201ENSMUST00000188837 117 ntBASIC14.96□□□□□ -0.01
Col9a1Q05722 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col9a1Q05722 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC14.96□□□□□ -0.01
Col9a1Q05722 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC14.96□□□□□ -0.01
Col9a1Q05722 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col9a1Q05722 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Col9a1Q05722 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Col9a1Q05722 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col9a1Q05722 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.96□□□□□ -0.01
Col9a1Q05722 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Col9a1Q05722 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col9a1Q05722 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col9a1Q05722 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col9a1Q05722 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col9a1Q05722 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col9a1Q05722 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Col9a1Q05722 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms