Protein–RNA interactions for Protein: Q04742

Emx1, Homeobox protein EMX1, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Emx1Q04742 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Emx1Q04742 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Emx1Q04742 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Emx1Q04742 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Emx1Q04742 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Emx1Q04742 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.33□□□□□ -0.11
Emx1Q04742 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Emx1Q04742 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Emx1Q04742 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.33□□□□□ -0.12
Emx1Q04742 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Emx1Q04742 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Emx1Q04742 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Emx1Q04742 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Emx1Q04742 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Emx1Q04742 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Emx1Q04742 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Emx1Q04742 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Emx1Q04742 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Emx1Q04742 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Emx1Q04742 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Emx1Q04742 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Emx1Q04742 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Emx1Q04742 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.33□□□□□ -0.12
Emx1Q04742 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Emx1Q04742 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Emx1Q04742 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Emx1Q04742 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Emx1Q04742 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Emx1Q04742 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Emx1Q04742 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Emx1Q04742 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Emx1Q04742 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Emx1Q04742 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Emx1Q04742 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Emx1Q04742 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Emx1Q04742 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.33□□□□□ -0.12
Emx1Q04742 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Emx1Q04742 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Emx1Q04742 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.33□□□□□ -0.12
Emx1Q04742 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Emx1Q04742 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Emx1Q04742 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Emx1Q04742 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Emx1Q04742 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Emx1Q04742 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Emx1Q04742 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Emx1Q04742 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Emx1Q04742 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Emx1Q04742 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Emx1Q04742 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.32□□□□□ -0.12
Emx1Q04742 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.32□□□□□ -0.12
Emx1Q04742 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Emx1Q04742 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Emx1Q04742 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Emx1Q04742 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Emx1Q04742 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Emx1Q04742 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Emx1Q04742 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Emx1Q04742 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Emx1Q04742 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Emx1Q04742 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Emx1Q04742 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Emx1Q04742 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Emx1Q04742 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Emx1Q04742 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Emx1Q04742 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Emx1Q04742 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.31□□□□□ -0.12
Emx1Q04742 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.31□□□□□ -0.12
Emx1Q04742 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Emx1Q04742 Gm18421-201ENSMUST00000204122 625 ntBASIC14.31□□□□□ -0.12
Emx1Q04742 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Emx1Q04742 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Emx1Q04742 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Emx1Q04742 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Emx1Q04742 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.31□□□□□ -0.12
Emx1Q04742 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms