Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
GabpaQ00422 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GabpaQ00422 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GabpaQ00422 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GabpaQ00422 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GabpaQ00422 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
GabpaQ00422 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GabpaQ00422 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.37■□□□□ 0.37
GabpaQ00422 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GabpaQ00422 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GabpaQ00422 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GabpaQ00422 Rprl2-201ENSMUST00000157150 290 ntBASIC17.37■□□□□ 0.37
GabpaQ00422 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.37■□□□□ 0.37
GabpaQ00422 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.37■□□□□ 0.37
GabpaQ00422 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.37■□□□□ 0.37
GabpaQ00422 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
GabpaQ00422 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GabpaQ00422 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GabpaQ00422 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GabpaQ00422 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.37■□□□□ 0.37
GabpaQ00422 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GabpaQ00422 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GabpaQ00422 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GabpaQ00422 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GabpaQ00422 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GabpaQ00422 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GabpaQ00422 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GabpaQ00422 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
GabpaQ00422 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GabpaQ00422 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
GabpaQ00422 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
GabpaQ00422 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.36■□□□□ 0.37
GabpaQ00422 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GabpaQ00422 Gm43474-201ENSMUST00000196415 774 ntBASIC17.36■□□□□ 0.37
GabpaQ00422 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GabpaQ00422 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GabpaQ00422 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.36■□□□□ 0.37
GabpaQ00422 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
GabpaQ00422 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
GabpaQ00422 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
GabpaQ00422 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
GabpaQ00422 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GabpaQ00422 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GabpaQ00422 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GabpaQ00422 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GabpaQ00422 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GabpaQ00422 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
GabpaQ00422 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
GabpaQ00422 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
GabpaQ00422 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GabpaQ00422 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.35■□□□□ 0.37
GabpaQ00422 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
GabpaQ00422 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GabpaQ00422 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GabpaQ00422 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.35■□□□□ 0.37
GabpaQ00422 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.35■□□□□ 0.37
GabpaQ00422 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
GabpaQ00422 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GabpaQ00422 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
GabpaQ00422 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GabpaQ00422 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.35■□□□□ 0.37
GabpaQ00422 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.35■□□□□ 0.37
GabpaQ00422 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GabpaQ00422 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.35■□□□□ 0.37
GabpaQ00422 Gm10154-201ENSMUST00000084445 354 ntBASIC17.35■□□□□ 0.37
GabpaQ00422 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.35■□□□□ 0.37
GabpaQ00422 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GabpaQ00422 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GabpaQ00422 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.35■□□□□ 0.37
GabpaQ00422 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GabpaQ00422 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.35■□□□□ 0.37
GabpaQ00422 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GabpaQ00422 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GabpaQ00422 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GabpaQ00422 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
GabpaQ00422 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
GabpaQ00422 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
GabpaQ00422 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.34■□□□□ 0.37
GabpaQ00422 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.34■□□□□ 0.37
GabpaQ00422 Gm13616-201ENSMUST00000120600 222 ntBASIC17.34■□□□□ 0.37
GabpaQ00422 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GabpaQ00422 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GabpaQ00422 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
GabpaQ00422 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.34■□□□□ 0.37
GabpaQ00422 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GabpaQ00422 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
GabpaQ00422 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GabpaQ00422 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
GabpaQ00422 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.34■□□□□ 0.37
GabpaQ00422 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
GabpaQ00422 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GabpaQ00422 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GabpaQ00422 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GabpaQ00422 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
GabpaQ00422 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
GabpaQ00422 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GabpaQ00422 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
GabpaQ00422 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GabpaQ00422 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.33■□□□□ 0.37
GabpaQ00422 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms