Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Gm5867-201ENSMUST00000063197 592 ntBASIC14.51□□□□□ -0.09
Nkx3-2P97503 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx3-2P97503 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx3-2P97503 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx3-2P97503 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx3-2P97503 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx3-2P97503 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx3-2P97503 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx3-2P97503 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx3-2P97503 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Nkx3-2P97503 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx3-2P97503 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Nkx3-2P97503 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Nkx3-2P97503 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx3-2P97503 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.5□□□□□ -0.09
Nkx3-2P97503 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nkx3-2P97503 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx3-2P97503 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx3-2P97503 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.5□□□□□ -0.09
Nkx3-2P97503 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx3-2P97503 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx3-2P97503 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.5□□□□□ -0.09
Nkx3-2P97503 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx3-2P97503 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx3-2P97503 Asic1-205ENSMUST00000228185 1818 ntBASIC14.5□□□□□ -0.09
Nkx3-2P97503 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Nkx3-2P97503 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Nkx3-2P97503 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Nkx3-2P97503 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Gm18489-201ENSMUST00000172565 551 ntBASIC14.49□□□□□ -0.09
Nkx3-2P97503 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx3-2P97503 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Nkx3-2P97503 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx3-2P97503 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Nkx3-2P97503 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx3-2P97503 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx3-2P97503 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx3-2P97503 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.48□□□□□ -0.09
Nkx3-2P97503 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx3-2P97503 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Nkx3-2P97503 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx3-2P97503 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx3-2P97503 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.48□□□□□ -0.09
Nkx3-2P97503 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms