Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hist1h3bP84228 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h3bP84228 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hist1h3bP84228 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.51□□□□□ -0.25
Hist1h3bP84228 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.51□□□□□ -0.25
Hist1h3bP84228 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.51□□□□□ -0.25
Hist1h3bP84228 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hist1h3bP84228 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h3bP84228 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h3bP84228 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h3bP84228 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Hist1h3bP84228 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h3bP84228 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.5□□□□□ -0.25
Hist1h3bP84228 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.5□□□□□ -0.25
Hist1h3bP84228 Gm15358-201ENSMUST00000119249 520 ntBASIC13.5□□□□□ -0.25
Hist1h3bP84228 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.5□□□□□ -0.25
Hist1h3bP84228 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h3bP84228 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h3bP84228 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h3bP84228 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h3bP84228 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hist1h3bP84228 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.5□□□□□ -0.25
Hist1h3bP84228 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.49□□□□□ -0.25
Hist1h3bP84228 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Hist1h3bP84228 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Hist1h3bP84228 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h3bP84228 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.48□□□□□ -0.25
Hist1h3bP84228 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Hist1h3bP84228 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h3bP84228 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h3bP84228 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h3bP84228 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h3bP84228 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h3bP84228 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h3bP84228 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h3bP84228 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h3bP84228 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h3bP84228 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h3bP84228 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h3bP84228 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h3bP84228 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h3bP84228 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Hist1h3bP84228 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.48□□□□□ -0.25
Hist1h3bP84228 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Hist1h3bP84228 Gm9103-201ENSMUST00000119371 405 ntBASIC13.48□□□□□ -0.25
Hist1h3bP84228 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.48□□□□□ -0.25
Hist1h3bP84228 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hist1h3bP84228 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.48□□□□□ -0.25
Hist1h3bP84228 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.48□□□□□ -0.25
Hist1h3bP84228 Birc2-201ENSMUST00000054878 378 ntBASIC13.48□□□□□ -0.25
Hist1h3bP84228 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Hist1h3bP84228 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms