Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcdP82347 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SgcdP82347 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcdP82347 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SgcdP82347 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.27□□□□□ -0.12
SgcdP82347 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcdP82347 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.27□□□□□ -0.12
SgcdP82347 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcdP82347 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
SgcdP82347 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.27□□□□□ -0.12
SgcdP82347 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SgcdP82347 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SgcdP82347 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.27□□□□□ -0.12
SgcdP82347 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcdP82347 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcdP82347 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcdP82347 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SgcdP82347 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SgcdP82347 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcdP82347 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.27□□□□□ -0.13
SgcdP82347 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcdP82347 Gm29518-201ENSMUST00000190858 372 ntBASIC14.27□□□□□ -0.13
SgcdP82347 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.27□□□□□ -0.13
SgcdP82347 Efs-202ENSMUST00000227037 2540 ntBASIC14.27□□□□□ -0.13
SgcdP82347 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
SgcdP82347 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcdP82347 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcdP82347 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcdP82347 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcdP82347 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcdP82347 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.27□□□□□ -0.13
SgcdP82347 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.27□□□□□ -0.13
SgcdP82347 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SgcdP82347 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcdP82347 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcdP82347 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcdP82347 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
SgcdP82347 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SgcdP82347 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcdP82347 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SgcdP82347 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.26□□□□□ -0.13
SgcdP82347 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcdP82347 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcdP82347 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcdP82347 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcdP82347 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcdP82347 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SgcdP82347 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SgcdP82347 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcdP82347 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcdP82347 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SgcdP82347 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcdP82347 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcdP82347 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcdP82347 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcdP82347 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.25□□□□□ -0.13
SgcdP82347 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcdP82347 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SgcdP82347 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcdP82347 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcdP82347 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.25□□□□□ -0.13
SgcdP82347 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcdP82347 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcdP82347 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.25□□□□□ -0.13
SgcdP82347 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SgcdP82347 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcdP82347 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcdP82347 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcdP82347 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.25□□□□□ -0.13
SgcdP82347 Gm18669-201ENSMUST00000216049 778 ntBASIC14.25□□□□□ -0.13
SgcdP82347 Gm18115-201ENSMUST00000221209 621 ntBASIC14.25□□□□□ -0.13
SgcdP82347 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcdP82347 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.25□□□□□ -0.13
SgcdP82347 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcdP82347 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcdP82347 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcdP82347 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SgcdP82347 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SgcdP82347 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SgcdP82347 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SgcdP82347 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcdP82347 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.24□□□□□ -0.13
SgcdP82347 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcdP82347 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
SgcdP82347 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
SgcdP82347 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcdP82347 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcdP82347 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcdP82347 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SgcdP82347 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcdP82347 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.24□□□□□ -0.13
SgcdP82347 Gm17808-201ENSMUST00000200859 894 ntBASIC14.24□□□□□ -0.13
SgcdP82347 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SgcdP82347 Gm7213-201ENSMUST00000215977 950 ntBASIC14.24□□□□□ -0.13
SgcdP82347 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SgcdP82347 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
SgcdP82347 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SgcdP82347 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcdP82347 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcdP82347 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms