Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Crnkl1P63154 Gm27389-201ENSMUST00000183622 195 ntBASIC15.23■□□□□ 0.03
Crnkl1P63154 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Crnkl1P63154 Efs-202ENSMUST00000227037 2540 ntBASIC15.23■□□□□ 0.03
Crnkl1P63154 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Crnkl1P63154 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Crnkl1P63154 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Crnkl1P63154 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Crnkl1P63154 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.23■□□□□ 0.03
Crnkl1P63154 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Crnkl1P63154 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Crnkl1P63154 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Crnkl1P63154 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Crnkl1P63154 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Crnkl1P63154 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.23■□□□□ 0.03
Crnkl1P63154 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Crnkl1P63154 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Crnkl1P63154 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Crnkl1P63154 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.22■□□□□ 0.03
Crnkl1P63154 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Crnkl1P63154 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Crnkl1P63154 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Crnkl1P63154 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.22■□□□□ 0.03
Crnkl1P63154 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
Crnkl1P63154 Mir1668-201ENSMUST00000184114 107 ntBASIC15.22■□□□□ 0.03
Crnkl1P63154 Gm7977-201ENSMUST00000193787 748 ntBASIC15.22■□□□□ 0.03
Crnkl1P63154 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Crnkl1P63154 Gm18032-201ENSMUST00000222541 538 ntBASIC15.22■□□□□ 0.03
Crnkl1P63154 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Crnkl1P63154 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Crnkl1P63154 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Crnkl1P63154 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.22■□□□□ 0.03
Crnkl1P63154 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Crnkl1P63154 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Crnkl1P63154 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Crnkl1P63154 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Crnkl1P63154 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Crnkl1P63154 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Crnkl1P63154 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Crnkl1P63154 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Crnkl1P63154 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Crnkl1P63154 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Crnkl1P63154 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Crnkl1P63154 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Crnkl1P63154 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.21■□□□□ 0.03
Crnkl1P63154 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Crnkl1P63154 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Crnkl1P63154 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Crnkl1P63154 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Crnkl1P63154 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Crnkl1P63154 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Crnkl1P63154 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Crnkl1P63154 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.21■□□□□ 0.03
Crnkl1P63154 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Crnkl1P63154 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.21■□□□□ 0.03
Crnkl1P63154 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Crnkl1P63154 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Crnkl1P63154 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Crnkl1P63154 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Crnkl1P63154 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Crnkl1P63154 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Crnkl1P63154 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Crnkl1P63154 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Crnkl1P63154 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Crnkl1P63154 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Crnkl1P63154 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Crnkl1P63154 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Crnkl1P63154 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Crnkl1P63154 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Crnkl1P63154 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Crnkl1P63154 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Crnkl1P63154 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.2■□□□□ 0.02
Crnkl1P63154 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Crnkl1P63154 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Crnkl1P63154 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.2■□□□□ 0.02
Crnkl1P63154 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Crnkl1P63154 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Crnkl1P63154 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Crnkl1P63154 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.2■□□□□ 0.02
Crnkl1P63154 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Crnkl1P63154 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Crnkl1P63154 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.2■□□□□ 0.02
Crnkl1P63154 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Crnkl1P63154 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Crnkl1P63154 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Crnkl1P63154 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Crnkl1P63154 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Crnkl1P63154 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Crnkl1P63154 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Crnkl1P63154 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Crnkl1P63154 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Crnkl1P63154 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Crnkl1P63154 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.2■□□□□ 0.02
Crnkl1P63154 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Crnkl1P63154 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Crnkl1P63154 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Crnkl1P63154 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Crnkl1P63154 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Crnkl1P63154 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Crnkl1P63154 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms