Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm5P62322 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.84□□□□□ -0.35
Lsm5P62322 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm5P62322 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lsm5P62322 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.83□□□□□ -0.35
Lsm5P62322 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.83□□□□□ -0.35
Lsm5P62322 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lsm5P62322 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lsm5P62322 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm5P62322 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
Lsm5P62322 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm5P62322 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm5P62322 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm5P62322 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm5P62322 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm5P62322 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm5P62322 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm5P62322 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm5P62322 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm5P62322 Gm5643-201ENSMUST00000117081 966 ntBASIC12.83□□□□□ -0.36
Lsm5P62322 Gm12134-201ENSMUST00000122109 520 ntBASIC12.83□□□□□ -0.36
Lsm5P62322 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.83□□□□□ -0.36
Lsm5P62322 Gm8495-201ENSMUST00000188740 694 ntBASIC12.83□□□□□ -0.36
Lsm5P62322 Gm37856-201ENSMUST00000191634 999 ntBASIC12.83□□□□□ -0.36
Lsm5P62322 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.83□□□□□ -0.36
Lsm5P62322 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm5P62322 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Lsm5P62322 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.83□□□□□ -0.36
Lsm5P62322 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm5P62322 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm5P62322 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm5P62322 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm5P62322 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Lsm5P62322 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.83□□□□□ -0.36
Lsm5P62322 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm5P62322 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm5P62322 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm5P62322 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Lsm5P62322 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm5P62322 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm5P62322 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm5P62322 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm5P62322 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm5P62322 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm5P62322 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm5P62322 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm5P62322 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm5P62322 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm5P62322 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm5P62322 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lsm5P62322 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.82□□□□□ -0.36
Lsm5P62322 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm5P62322 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm5P62322 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Lsm5P62322 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm5P62322 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lsm5P62322 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lsm5P62322 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm5P62322 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lsm5P62322 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Lsm5P62322 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lsm5P62322 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm5P62322 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Lsm5P62322 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm5P62322 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm5P62322 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.81□□□□□ -0.36
Lsm5P62322 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm5P62322 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.81□□□□□ -0.36
Lsm5P62322 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Lsm5P62322 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm5P62322 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm5P62322 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm5P62322 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm5P62322 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm5P62322 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm5P62322 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lsm5P62322 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm5P62322 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.81□□□□□ -0.36
Lsm5P62322 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm5P62322 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.81□□□□□ -0.36
Lsm5P62322 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.81□□□□□ -0.36
Lsm5P62322 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm5P62322 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Lsm5P62322 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm5P62322 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm5P62322 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm5P62322 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Lsm5P62322 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.81□□□□□ -0.36
Lsm5P62322 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Lsm5P62322 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm5P62322 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.81□□□□□ -0.36
Lsm5P62322 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Lsm5P62322 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.81□□□□□ -0.36
Lsm5P62322 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm5P62322 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lsm5P62322 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lsm5P62322 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lsm5P62322 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lsm5P62322 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm5P62322 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms