Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm3P62311 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm3P62311 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm3P62311 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm3P62311 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm3P62311 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.05□□□□□ -0.16
Lsm3P62311 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Lsm3P62311 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm3P62311 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm3P62311 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.05□□□□□ -0.16
Lsm3P62311 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm3P62311 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm3P62311 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm3P62311 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.05□□□□□ -0.16
Lsm3P62311 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm3P62311 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm3P62311 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm3P62311 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm3P62311 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.05□□□□□ -0.16
Lsm3P62311 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.05□□□□□ -0.16
Lsm3P62311 Gm18421-201ENSMUST00000204122 625 ntBASIC14.05□□□□□ -0.16
Lsm3P62311 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm3P62311 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm3P62311 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm3P62311 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm3P62311 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm3P62311 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Lsm3P62311 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm3P62311 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm3P62311 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Lsm3P62311 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm3P62311 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm3P62311 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm3P62311 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm3P62311 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm3P62311 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Lsm3P62311 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm3P62311 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.05□□□□□ -0.16
Lsm3P62311 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm3P62311 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm3P62311 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.04□□□□□ -0.16
Lsm3P62311 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Lsm3P62311 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm3P62311 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm3P62311 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm3P62311 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm3P62311 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.04□□□□□ -0.16
Lsm3P62311 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm3P62311 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.04□□□□□ -0.16
Lsm3P62311 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm3P62311 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.04□□□□□ -0.16
Lsm3P62311 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm3P62311 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm3P62311 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm3P62311 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm3P62311 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm3P62311 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm3P62311 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.04□□□□□ -0.16
Lsm3P62311 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm3P62311 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm3P62311 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm3P62311 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm3P62311 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.04□□□□□ -0.16
Lsm3P62311 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Lsm3P62311 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm3P62311 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Lsm3P62311 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm3P62311 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Lsm3P62311 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm3P62311 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm3P62311 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Lsm3P62311 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm3P62311 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Lsm3P62311 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Lsm3P62311 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.04□□□□□ -0.16
Lsm3P62311 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Lsm3P62311 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm3P62311 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.03□□□□□ -0.16
Lsm3P62311 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm3P62311 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm3P62311 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm3P62311 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm3P62311 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm3P62311 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm3P62311 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm3P62311 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.03□□□□□ -0.16
Lsm3P62311 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.03□□□□□ -0.16
Lsm3P62311 Gm27405-201ENSMUST00000184201 112 ntBASIC14.03□□□□□ -0.16
Lsm3P62311 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm3P62311 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm3P62311 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Lsm3P62311 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.03□□□□□ -0.16
Lsm3P62311 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm3P62311 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Lsm3P62311 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm3P62311 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm3P62311 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.03□□□□□ -0.16
Lsm3P62311 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm3P62311 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Lsm3P62311 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms